5F38
X-ray crystal structure of a thiolase from Escherichia coli at 1.8 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth C] | d5f38c1 | Alpha and beta proteins (a/b) | Thiolase-like | Thiolase-like | automated matches | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
D [auth C] | d5f38c3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
A [auth B] | d5f38b1 | Alpha and beta proteins (a/b) | Thiolase-like | Thiolase-like | automated matches | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B [auth A] | d5f38a1 | Alpha and beta proteins (a/b) | Thiolase-like | Thiolase-like | automated matches | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
C [auth D] | d5f38d1 | Alpha and beta proteins (a/b) | Thiolase-like | Thiolase-like | automated matches | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
C [auth D] | d5f38d3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth C] | PF00108 | e5f38C2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF00108 | ECOD (1.6) |
D [auth C] | PF02803 | e5f38C1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF02803 | ECOD (1.6) |
A [auth B] | PF00108 | e5f38B2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF00108 | ECOD (1.6) |
A [auth B] | PF02803 | e5f38B1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF02803 | ECOD (1.6) |
B [auth A] | PF00108 | e5f38A2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF00108 | ECOD (1.6) |
B [auth A] | PF02803 | e5f38A1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF02803 | ECOD (1.6) |
C [auth D] | PF00108 | e5f38D2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF00108 | ECOD (1.6) |
C [auth D] | PF02803 | e5f38D1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF02803 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D [auth C] | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (4.3.0) |
A [auth B] | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (4.3.0) |
B [auth A] | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (4.3.0) |
C [auth D] | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
D [auth C] | PF02803 | Thiolase, C-terminal domain (Thiolase_C) | Thiolase, C-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain |
D [auth C] | PF00108 | Thiolase, N-terminal domain (Thiolase_N) | Thiolase, N-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain |
A [auth B] | PF02803 | Thiolase, C-terminal domain (Thiolase_C) | Thiolase, C-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain |
A [auth B] | PF00108 | Thiolase, N-terminal domain (Thiolase_N) | Thiolase, N-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain |
B [auth A] | PF02803 | Thiolase, C-terminal domain (Thiolase_C) | Thiolase, C-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain |
B [auth A] | PF00108 | Thiolase, N-terminal domain (Thiolase_N) | Thiolase, N-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain |
C [auth D] | PF02803 | Thiolase, C-terminal domain (Thiolase_C) | Thiolase, C-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain |
C [auth D] | PF00108 | Thiolase, N-terminal domain (Thiolase_N) | Thiolase, N-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
D [auth C] | CSX | Parent Component: CYS :  AA0451 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 |
D [auth C] | MLY | Parent Component: LYS :  AA0451 , AA0075 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 |
A [auth B] | CSX | Parent Component: CYS :  AA0451 , AA0075 , AA0451 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 |
A [auth B] | MLY | Parent Component: LYS :  AA0451 , AA0075 , AA0451 , AA0075 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 |
B [auth A] | CSX | Parent Component: CYS :  AA0451 , AA0075 , AA0451 , AA0075 , AA0451 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 |
B [auth A] | MLY | Parent Component: LYS :  AA0451 , AA0075 , AA0451 , AA0075 , AA0451 , AA0075 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 |
C [auth D] | CSX | Parent Component: CYS :  AA0451 , AA0075 , AA0451 , AA0075 , AA0451 , AA0075 , AA0451 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 |
C [auth D] | MLY | Parent Component: LYS :  AA0451 , AA0075 , AA0451 , AA0075 , AA0451 , AA0075 , AA0451 , AA0075 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , N6,N6-dimethyl-L-lysine MOD:00084 |