5EN8
Crystal structure of the N-terminal region of Smu1
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KOG0275_1st | e5en8A1 | A: alpha duplicates or obligate multimers | X: Lis-homology dimerization domain (From Topology) | H: Lis-homology dimerization domain (From Topology) | T: Lis-homology dimerization domain | F: KOG0275_1st | ECOD (1.6) |
A | KOG0275_2nd | e5en8A2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Helical domain in TOPLESS related protein 2 (TPR2) (From Topology) | T: Helical domain in TOPLESS related protein 2 (TPR2) | F: KOG0275_2nd | ECOD (1.6) |
B | KOG0275_1st | e5en8B1 | A: alpha duplicates or obligate multimers | X: Lis-homology dimerization domain (From Topology) | H: Lis-homology dimerization domain (From Topology) | T: Lis-homology dimerization domain | F: KOG0275_1st | ECOD (1.6) |
B | KOG0275_2nd | e5en8B2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Helical domain in TOPLESS related protein 2 (TPR2) (From Topology) | T: Helical domain in TOPLESS related protein 2 (TPR2) | F: KOG0275_2nd | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17814 | LisH-like dimerisation domain (LisH_TPL) | LisH-like dimerisation domain | TOPLESS (TPL) proteins have a highly conserved N-terminal domain containing a lissencephaly homologous (LisH) dimerization motif [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR006595 | CTLH, C-terminal LisH motif | Domain | |
IPR045184 | WD40 repeat-containing protein SMU1 | Family | |
IPR001680 | WD40 repeat | Repeat | |
IPR020472 | G-protein beta WD-40 repeat | Repeat | |
IPR006594 | LIS1 homology motif | Conserved Site | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |