Crystal structure of UfSP from C.elegans


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BFGE-sulfatasee5ejjB1 A: alpha arraysX: Alpha-crystallin B chain N-terminal domainH: profilin-likeT: profilin-likeF: FGE-sulfataseECOD (v295.2)
APeptidase_C78e5ejjA1 A: alpha arraysX: Alpha-crystallin B chain N-terminal domainH: Alpha-crystallin B chain N-terminal domainT: Alpha-crystallin B chain N-terminal domainF: Peptidase_C78ECOD (v295.2)
ADynamin_Ne5ejjA2 A: alpha arraysX: Alpha-crystallin B chain N-terminal domainH: Alpha-crystallin B chain N-terminal domainT: Alpha-crystallin B chain N-terminal domainF: Dynamin_NECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.90.70.130 Alpha Beta Alpha-Beta Complex Cathepsin B Chain ACATH (utative)
A3.90.70.130 Alpha Beta Alpha-Beta Complex Cathepsin B Chain ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF20908Ubiquitin-fold modifier 1 specific protease 2, N-terminal (UfSP2_N)Ubiquitin-fold modifier 1 specific protease 2, N-terminalThis domain is found at the N-terminal end of the eukaryotic protein Ubiquitin-fold modifier 1 (Ufm1) specific protease 2 (UfSP2). UfSP2 is a cysteine protease which recognises and hydrolyses the peptide bond at the C-terminal Gly residue of the prot ...This domain is found at the N-terminal end of the eukaryotic protein Ubiquitin-fold modifier 1 (Ufm1) specific protease 2 (UfSP2). UfSP2 is a cysteine protease which recognises and hydrolyses the peptide bond at the C-terminal Gly residue of the protein Ufm1, a ubiquitin- like modifier. This protein is organised into two domains: the catalytic C-terminal (Pfam:PF07910) and a N-terminal showing a six- stranded beta-sheet with five helices. This entry represents the most N-terminal beta-strand [1,2].
Domain
A, B
PF22084Ufm1 specific protease UfSP N-terminal MPN domain (UfSP_MPN_N)Ufm1 specific protease UfSP N-terminal MPN domainUfSP is a cysteine protease that activates Ufm1 from its precursor by processing the C-terminus to expose the conserved Gly necessary for substrate conjugation and de-conjugates Ufm1 from the substrate. UfSP from C. elegans consists of three domains: ...UfSP is a cysteine protease that activates Ufm1 from its precursor by processing the C-terminus to expose the conserved Gly necessary for substrate conjugation and de-conjugates Ufm1 from the substrate. UfSP from C. elegans consists of three domains: MPN domain, N-domain and a catalytic domain. This entry represents the MPN domain that forms an alpha/beta globular structure with a central mixed beta-sheet packed on both sides with helices and a pair of two strands and a helix. This domain modulates both substrate recognition and deufmylation activity [1-2].
Domain
A, B
PF07910Peptidase family C78 (Peptidase_C78)Peptidase family C78- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Ufm1-specific protease