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 5EAZ | pdb_00005eaz

crystal form I of YfiB belonging to space groups P21

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5eaza_ Alpha and beta proteins (a+b) Bacillus chorismate mutase-like OmpA-like automated matches automated matches (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], SCOPe (2.08)
Bd5eazb_ Alpha and beta proteins (a+b) Bacillus chorismate mutase-like OmpA-like automated matches automated matches (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], SCOPe (2.08)
Dd5eazd_ Alpha and beta proteins (a+b) Bacillus chorismate mutase-like OmpA-like automated matches automated matches (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], SCOPe (2.08)
Cd5eazc_ Alpha and beta proteins (a+b) Bacillus chorismate mutase-like OmpA-like automated matches automated matches (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyOmpA-like 8092163 3001650 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyOmpA-like 8092163 3001650 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyOmpA-like 8092163 3001650 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyOmpA-like 8092163 3001650 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATFIIE_betae5eazA1 A: alpha arraysX: Alpha helical domain of ribonucleotide reductasesH: Alpha helical domain of ribonucleotide reductasesT: Alpha helical domain of ribonucleotide reductasesF: TFIIE_betaECOD (v295.2)
BTFIIE_betae5eazB1 A: alpha arraysX: Alpha helical domain of ribonucleotide reductasesH: Alpha helical domain of ribonucleotide reductasesT: Alpha helical domain of ribonucleotide reductasesF: TFIIE_betaECOD (v295.2)
DTFIIE_betae5eazD1 A: alpha arraysX: Alpha helical domain of ribonucleotide reductasesH: Alpha helical domain of ribonucleotide reductasesT: Alpha helical domain of ribonucleotide reductasesF: TFIIE_betaECOD (v295.2)
CTFIIE_betae5eazC1 A: alpha arraysX: Alpha helical domain of ribonucleotide reductasesH: Alpha helical domain of ribonucleotide reductasesT: Alpha helical domain of ribonucleotide reductasesF: TFIIE_betaECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1330.60 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)
B3.30.1330.60 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)
D3.30.1330.60 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)
C3.30.1330.60 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00691OmpA family (OmpA)OmpA family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
YfiB-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR006664Outer membrane protein, bacterialDomain
A, B, C, D
IPR006665OmpA-like domainDomain
A, B, C, D
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
A, B, C, D
IPR036737OmpA-like domain superfamilyHomologous Superfamily