5E8H
Crystal structure of geranylfarnesyl pyrophosphate synthases 2 from Arabidopsis thaliana
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5e8ha_ | All alpha proteins | Terpenoid synthases | Terpenoid synthases | automated matches | automated matches | Mouse-ear cress (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
B | d5e8hb_ | All alpha proteins | Terpenoid synthases | Terpenoid synthases | automated matches | automated matches | Mouse-ear cress (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Isoprenyl diphosphate synthases | 8059006 | 4001453 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Terpenoid synthases | 8059007 | 3001615 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Terpenoid synthases | 8059007 | 3001615 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00348 | e5e8hA1 | A: alpha bundles | X: Terpenoid synthases (From Topology) | H: Terpenoid synthases (From Topology) | T: Terpenoid synthases | F: PF00348 | ECOD (1.6) |
B | PF00348 | e5e8hB1 | A: alpha bundles | X: Terpenoid synthases (From Topology) | H: Terpenoid synthases (From Topology) | T: Terpenoid synthases | F: PF00348 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.600.10 | Mainly Alpha | Orthogonal Bundle | Farnesyl Diphosphate Synthase | Farnesyl Diphosphate Synthase | CATH (4.3.0) |
B | 1.10.600.10 | Mainly Alpha | Orthogonal Bundle | Farnesyl Diphosphate Synthase | Farnesyl Diphosphate Synthase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00348 | Polyprenyl synthetase (polyprenyl_synt) | Polyprenyl synthetase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000092 | Polyprenyl synthetase | Family | |
IPR053378 | Prenyl diphosphate synthase | Family | |
IPR008949 | Isoprenoid synthase domain superfamily | Homologous Superfamily | |
IPR033749 | Polyprenyl synthetase, conserved site | Conserved Site |