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 5DZG | pdb_00005dzg

Crystal Structure of the catalytic nucleophile mutant of VvEG16 in complex with a xyloglucan tetradecasaccharide

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8097780 3000120 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8097780 3000120 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be5dzgB1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF:ECOD (v295.2)
Ae5dzgA1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF:ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.200 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
A2.60.120.200 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00722Glycosyl hydrolases family 16 (Glyco_hydro_16)Glycosyl hydrolases family 16Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
VvEG16, endo-glucanase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR008264Beta-glucanaseFamily
A, B
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
A, B
IPR000757Beta-glucanase-like, N-terminal domainDomain
A, B
IPR044791Beta-glucanase/XTHFamily