Annotations: 5DY9

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Hfq_1	e5dy9A1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
B	Hfq_1	e5dy9B1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
C	Hfq_1	e5dy9C1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
D	Hfq_1	e5dy9D1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
E	Hfq_1	e5dy9E1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
F	Hfq_1	e5dy9F1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
G	Hfq_1	e5dy9G1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
H	Hfq_1	e5dy9H1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
I	Hfq_1	e5dy9I1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
J	Hfq_1	e5dy9J1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
K	Hfq_1	e5dy9K1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)
L	Hfq_1	e5dy9L1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Hfq_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
B	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
C	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
D	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
E	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
F	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
G	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
H	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
I	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
J	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
K	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
L	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF17209	Hfq protein (Hfq)	Hfq protein	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Hfq-like protein	RNA binding binding organic cyclic compound binding nucleic acid binding	regulation of cellular process cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process cellular metabolic process regulation of cellular process cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process cellular metabolic process biological regulation primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process cellular process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR010920	LSM domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR005001	RNA-binding protein Hfq	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR047575	Sm domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.