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 5DTE | pdb_00005dte

Crystal Structure of an ABC transporter periplasmic solute binding protein (IPR025997) from Actinobacillus succinogenes 130z(Asuc_0081, TARGET EFI-511065) with bound D-allose

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPeripla_BP_4e5dteD1 A: alpha arraysX: Hsp90 co-chaperone CDC37 middle domainH: Nucleoplasmin-like/VP (viral coat and capsid proteins)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Peripla_BP_4ECOD (v295.2)
CPeripla_BP_4e5dteC1 A: alpha arraysX: Hsp90 co-chaperone CDC37 middle domainH: Nucleoplasmin-like/VP (viral coat and capsid proteins)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Peripla_BP_4ECOD (v295.2)
BPeripla_BP_4e5dteB1 A: alpha arraysX: Hsp90 co-chaperone CDC37 middle domainH: Nucleoplasmin-like/VP (viral coat and capsid proteins)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Peripla_BP_4ECOD (v295.2)
APeripla_BP_4e5dteA1 A: alpha arraysX: Hsp90 co-chaperone CDC37 middle domainH: Nucleoplasmin-like/VP (viral coat and capsid proteins)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Peripla_BP_4ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
C3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
B3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
A3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13407Periplasmic binding protein domain (Peripla_BP_4)Periplasmic binding protein domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Monosaccharide-transporting ATPase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR025997Periplasmic binding proteinDomain
A, B, C, D
IPR028082Periplasmic binding protein-like IHomologous Superfamily