5DN5
Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01832 | e5dn5A1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: PF01832 | ECOD (1.6) |
B | PF01832 | e5dn5B1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: PF01832 | ECOD (1.6) |
C | PF01832 | e5dn5C1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: PF01832 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.530.10 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
A | 2.10.70.40 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
B | 1.10.530.10 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
B | 2.10.70.40 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
C | 1.10.530.10 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
C | 2.10.70.40 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01832 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Glucosaminidase) | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase | This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J Swiss:P75942 that has been shown to hydrolyse peptidoglycan [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013377 | Peptidoglycan hydrolase FlgJ | Family | |
IPR019301 | Flagellar protein FlgJ, N-terminal | Domain | |
IPR051056 | Glycosyl Hydrolase Family 73 | Family | |
IPR002901 | Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain | Domain |