5DIH
Structure of Haliangium ochraceum BMC-T HO-5812
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5diha1 | Alpha and beta proteins (a+b) | Ferredoxin-like | CcmK-like | automated matches | automated matches | (Haliangium ochraceum DSM 14365 ) [TaxId: 502025 ], | SCOPe (2.08) |
D | d5dihd1 | Alpha and beta proteins (a+b) | Ferredoxin-like | CcmK-like | automated matches | automated matches | (Haliangium ochraceum DSM 14365 ) [TaxId: 502025 ], | SCOPe (2.08) |
F | d5dihf1 | Alpha and beta proteins (a+b) | Ferredoxin-like | CcmK-like | automated matches | automated matches | (Haliangium ochraceum DSM 14365 ) [TaxId: 502025 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | BMC | e5dihA1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
B | BMC | e5dihB1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
C | BMC | e5dihC2 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
D | BMC | e5dihD2 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
E | BMC | e5dihE1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
F | BMC | e5dihF1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
B | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
C | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
D | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
E | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
F | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00936 | BMC domain (BMC) | BMC domain | Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Microcompartments protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011238 | Bacterial microcompartment shell protein PduT | Family | |
IPR000249 | Bacterial microcompartment domain | Domain | |
IPR050575 | Bacterial microcompartment shell | Family | |
IPR044872 | CcmK/CsoS1, bacterial microcompartment domain | Domain | |
IPR037233 | CcmK-like superfamily | Homologous Superfamily |