5CT1
The structure of the NK1 fragment of HGF/SF complexed with CHES
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5ct1a1 | Small proteins | Hairpin loop containing domain-like | Hairpin loop containing domain-like | Hairpin loop containing domain | Hepatocyte growth factor | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d5ct1a2 | Small proteins | Kringle-like | Kringle-like | Kringle modules | NK1 fragment of hepatocyte growth factor | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d5ct1b1 | Small proteins | Hairpin loop containing domain-like | Hairpin loop containing domain-like | Hairpin loop containing domain | Hepatocyte growth factor | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d5ct1b2 | Small proteins | Kringle-like | Kringle-like | Kringle modules | NK1 fragment of hepatocyte growth factor | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Hairpin loop containing domain-like | 8036022 | 3000707 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Kringle-like | 8036023 | 3000761 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Hairpin loop containing domain-like | 8036022 | 3000707 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Kringle-like | 8036023 | 3000761 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00051 | e5ct1A2 | A: few secondary structure elements | X: Kringle-like (From Topology) | H: Kringle-like (From Topology) | T: Kringle-like | F: PF00051 | ECOD (1.6) |
A | PF00024 | e5ct1A1 | A: few secondary structure elements | X: Hairpin loop containing domain-like (From Topology) | H: Hairpin loop containing domain-like (From Topology) | T: Hairpin loop containing domain-like | F: PF00024 | ECOD (1.6) |
B | PF00051 | e5ct1B2 | A: few secondary structure elements | X: Kringle-like (From Topology) | H: Kringle-like (From Topology) | T: Kringle-like | F: PF00051 | ECOD (1.6) |
B | PF00024 | e5ct1B1 | A: few secondary structure elements | X: Hairpin loop containing domain-like (From Topology) | H: Hairpin loop containing domain-like (From Topology) | T: Hairpin loop containing domain-like | F: PF00024 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.50.4.10 | Alpha Beta | 3-Layer(bba) Sandwich | Hepatocyte Growth Factor | Hepatocyte Growth Factor | CATH (4.3.0) |
A | 2.40.20.10 | Mainly Beta | Beta Barrel | Plasminogen Kringle 4 | Plasminogen Kringle 4 | CATH (4.3.0) |
B | 3.50.4.10 | Alpha Beta | 3-Layer(bba) Sandwich | Hepatocyte Growth Factor | Hepatocyte Growth Factor | CATH (4.3.0) |
B | 2.40.20.10 | Mainly Beta | Beta Barrel | Plasminogen Kringle 4 | Plasminogen Kringle 4 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00051 | Kringle domain (Kringle) | Kringle domain | Kringle domains have been found in plasminogen, hepatocyte growth factors, prothrombin, and apolipoprotein A. Structure is disulfide-rich, nearly all-beta. | Domain | |
PF00024 | PAN domain (PAN_1) | PAN domain | The PAN domain [1] contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some the ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018056 | Kringle, conserved site | Conserved Site | |
IPR003609 | PAN/Apple domain | Domain | |
IPR013806 | Kringle-like fold | Homologous Superfamily | |
IPR038178 | Kringle superfamily | Homologous Superfamily | |
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR050759 | Serine proteases and regulators with kringle domains | Family | |
IPR001314 | Peptidase S1A, chymotrypsin family | Family | |
IPR027284 | Hepatocyte growth factor | Family | |
IPR024174 | Hepatocyte growth factor/Macrophage stimulatory protein | Family | |
IPR001254 | Serine proteases, trypsin domain | Domain | |
IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold | Homologous Superfamily | |
IPR000001 | Kringle | Domain |