5CQE
2.1 Angstrom resolution crystal structure of matrix protein 1 (M1; residues 1-164) from Influenza A virus (A/Puerto Rico/8/34(H1N1))
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d5cqeb1 | All alpha proteins | Influenza virus matrix protein M1 | Influenza virus matrix protein M1 | Influenza virus matrix protein M1 | automated matches | (Influenza A virus (A/Puerto Rico/8/1934(H1N1)) ) [TaxId: 211044 ], | SCOPe (2.08) |
B | d5cqeb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Influenza A virus (A/Puerto Rico/8/1934(H1N1)) ) [TaxId: 211044 ], | SCOPe (2.08) |
A | d5cqea1 | All alpha proteins | Influenza virus matrix protein M1 | Influenza virus matrix protein M1 | Influenza virus matrix protein M1 | automated matches | (Influenza A virus (A/Puerto Rico/8/1934(H1N1)) ) [TaxId: 211044 ], | SCOPe (2.08) |
A | d5cqea2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Influenza A virus (A/Puerto Rico/8/1934(H1N1)) ) [TaxId: 211044 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Flu_M1 | e5cqeB1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
A | Flu_M1 | e5cqeA1 | A: alpha complex topology | X: Influenza virus matrix protein M1 (From Topology) | H: Influenza virus matrix protein M1 (From Topology) | T: Influenza virus matrix protein M1 | F: Flu_M1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.20.91.10 | Mainly Alpha | Up-down Bundle | Influenza Virus Matrix Protein | Chain A, domain 1 | CATH (4.3.0) |
B | 1.10.10.180 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Influenza matrix protein M1, N-terminal subdomain 2 | CATH (4.3.0) |
A | 1.20.91.10 | Mainly Alpha | Up-down Bundle | Influenza Virus Matrix Protein | Chain A, domain 1 | CATH (4.3.0) |
A | 1.10.10.180 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Influenza matrix protein M1, N-terminal subdomain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00598 | Influenza Matrix protein (M1) (Flu_M1) | Influenza Matrix protein (M1) | This protein forms a continuous shell on the inner side of the lipid bilayer, but its function is unclear. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015799 | Influenza matrix M1, N-terminal subdomain 2 | Homologous Superfamily | |
IPR015423 | Influenza matrix M1, N-terminal subdomain 1 | Homologous Superfamily | |
IPR036039 | Influenza virus matrix protein M1 | Homologous Superfamily | |
IPR013188 | Influenza matrix M1, C-terminal | Domain | |
IPR001561 | Influenza matrix M1, N-terminal | Domain | |
IPR037533 | Matrix protein 1 | Family |