Crystal structure of a trimeric influenza hemagglutinin stem in complex with an broadly neutralizing antibody CR9114
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth B] | T_Ag_DNA_bind | e5cjqB1 | A: beta barrels | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: RNA polymerase I subunits A49/A34.5 dimerization domains | F: T_Ag_DNA_bind | ECOD (v294.2) |
| C [auth A] | e5cjqA01 | A: beta barrels | X: Voltage-gated ion channels | H: Voltage-gated ion channels | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: | ECOD (v294.2) | |
| B [auth H] | T_Ag_DNA_bind | e5cjqH2 | A: beta barrels | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: RNA polymerase I subunits A49/A34.5 dimerization domains | F: T_Ag_DNA_bind | ECOD (v294.2) |
| B [auth H] | EF-hand_1, EF-hand_6, EF-hand_7 | e5cjqH3 | A: beta barrels | X: Lipocalins/Streptavidin | H: SAM/DNA-glycosylase | T: SAM domain-like | F: EF-hand_1, EF-hand_6, EF-hand_7 | ECOD (v294.2) |
| A [auth L] | T_Ag_DNA_bind | e5cjqL1 | A: beta barrels | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: RNA polymerase I subunits A49/A34.5 dimerization domains | F: T_Ag_DNA_bind | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D [auth B] | 3.90.20.10 | Alpha Beta | Alpha-Beta Complex | Hemagglutinin Ectodomain | Chain B | CATH (4.3.0) |
| B [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| B [auth H] | CR9114, anti-influenza hemagglutinin, neutralizing | VH-CH1 | Homo sapiens (human) | IGHV1-69*01, IGHV1-69*06, IGHV1-69*12, IGHV1-69*13, IGHV1-69*14, IGHV1-69D*01, IGHJ6*01, IGHJ6*02, IGHG1*03 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_LAMBDA | IMGT (202617-0) |
| A [auth L] | CR9114, anti-influenza hemagglutinin, neutralizing | L-LAMBDA | Homo sapiens (human) | IGLV1-44*01, IGLJ7*01, IGLC2*01, IGLC2*02, IGLC3*04 | V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA | IG | FAB-GAMMA-1_LAMBDA | IMGT (202617-0) |
