5BY8
The structure of Rpf2-Rrs1 explains its role in ribosome biogenesis
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Brix domain-like | 8045894 | 4004748 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Class II aaRS ABD-related | 8092350 | 3000465 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Class II aaRS ABD-related | 8092349 | 3000465 | SCOP2 (2022-06-29) |
B | SCOP2 Family | Rrs1-like | 8046716 | 4005257 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Rrs1-like | 8092360 | 3002595 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Brix | e5by8A1 | A: a/b three-layered sandwiches | X: Anticodon-binding domain of Class II aaRS (From Topology) | H: Anticodon-binding domain of Class II aaRS (From Topology) | T: Anticodon-binding domain of Class II aaRS | F: Brix | ECOD (1.6) |
B | RRS1 | e5by8B1 | A: a+b two layers | X: Rrs1 (From Topology) | H: Rrs1 (From Topology) | T: Rrs1 | F: RRS1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04427 | Brix domain (Brix) | Brix domain | - | Domain | |
PF04939 | Ribosome biogenesis regulatory protein (RRS1) (RRS1) | Ribosome biogenesis regulatory protein (RRS1) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR039770 | Ribosome biogenesis protein Rpf2 | Family | |
IPR007109 | Brix domain | Domain | |
IPR007023 | Ribosomal biogenesis regulatory protein | Family |