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 5AZ2 | pdb_00005az2

Crystal structure of the Fab fragment of 9E5, a murine monoclonal antibody specific for human epiregulin

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth L]d5az2l2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
B [auth L]d5az2l1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
A [auth H]d5az2h_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth L]PRMT_Ce5az2L1 A: alpha arraysX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsH: Dimerization domain of heterocyst differentiation protein HetRT: Dimerization domain of heterocyst differentiation protein HetRF: PRMT_CECOD (v295.2)
A [auth H]PRMT_Ce5az2H1 A: alpha arraysX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsH: Dimerization domain of heterocyst differentiation protein HetRT: Dimerization domain of heterocyst differentiation protein HetRF: PRMT_CECOD (v295.2)
A [auth H]NTP_transferasee5az2H2 A: alpha arraysX: Lipocalins/StreptavidinH: SAM/DNA-glycosylaseT: SAM domain-likeF: NTP_transferaseECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth L]9E5 Fab, anti-human epiregulin L-KAPPA Mus musculus (house mouse) IGKV19-93*01, IGKV19-93*02, IGKJ1*01, IGKJ2*01, IGKC*01, IGKC*02 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202637-0)
A [auth H]9E5 Fab, anti-human epiregulin VH-CH1 Mus musculus (house mouse) IGHV14-3*02, IGHJ3*01, IGHG1*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202637-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth L]Light ChainIGKV19 Kappa-SAbDab (2026-09-25)
A [auth H]Heavy ChainIGHV14 --SAbDab (2026-09-25)