5AUP
Crystal structure of the HypAB complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | HypA-like | 8057059 | 3002385 | SCOP2B (2021-05-27) |
C [auth H] | SCOP2B Superfamily | HypA-like | 8057059 | 3002385 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Simibi-like P-loop NTPases | 8057058 | 3002018 | SCOP2B (2021-05-27) |
D [auth I] | SCOP2B Superfamily | Simibi-like P-loop NTPases | 8057058 | 3002018 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01155 | e5aupA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: HypA Ni-binding domain (From Topology) | T: HypA Ni-binding domain | F: PF01155 | ECOD (1.6) |
A | F_UNCLASSIFIED | e5aupA2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth H] | PF01155 | e5aupH2 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: HypA Ni-binding domain (From Topology) | T: HypA Ni-binding domain | F: PF01155 | ECOD (1.6) |
C [auth H] | F_UNCLASSIFIED | e5aupH1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF10609 | e5aupB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF10609 | ECOD (1.6) |
D [auth I] | PF10609 | e5aupI1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF10609 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.2320.50 | Alpha Beta | 2-Layer Sandwich | hypothetical protein PF0899 fold | CATH (4.3.0) | |
C [auth H] | 3.30.2320.50 | Alpha Beta | 2-Layer Sandwich | hypothetical protein PF0899 fold | CATH (4.3.0) | |
B | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
D [auth I] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth H] | PF01155 | Hydrogenase/urease nickel incorporation, metallochaperone, hypA (HypA) | Hydrogenase/urease nickel incorporation, metallochaperone, hypA | HypA is a metallochaperone that binds nickel to bring it safely to its target. The targets for Hypa are the nickel-containing enzymes [Ni,Fe]-hydrogenase and urease. The nickel coordinates with four nitrogens within the protein. The four conserved cy ... | Domain |
B, D [auth I] | PF10609 | NUBPL iron-transfer P-loop NTPase (ParA) | NUBPL iron-transfer P-loop NTPase | - | Family |