4S0M
Crystal Structure of nucleoside diphosphate kinase at 1.92 A resolution from acinetobacter baumannii
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Nucleoside diphosphate kinase, NDK | 8100886 | 3001175 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Nucleoside diphosphate kinase, NDK | 8100886 | 3001175 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Nucleoside diphosphate kinase, NDK | 8100886 | 3001175 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Nucleoside diphosphate kinase, NDK | 8100886 | 3001175 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | Nucleoside diphosphate kinase, NDK | 8100886 | 3001175 | SCOP2B (2022-06-29) |
F [auth G] | SCOP2B Superfamily | Nucleoside diphosphate kinase, NDK | 8100886 | 3001175 | SCOP2B (2022-06-29) |
G [auth H] | SCOP2B Superfamily | Nucleoside diphosphate kinase, NDK | 8100886 | 3001175 | SCOP2B (2022-06-29) |
H [auth I] | SCOP2B Superfamily | Nucleoside diphosphate kinase, NDK | 8100886 | 3001175 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | NDK | e4s0mA1 | A: a+b two layers | X: Alpha-beta plaits | H: Nucleoside diphosphate kinases (From Topology) | T: Nucleoside diphosphate kinases | F: NDK | ECOD (1.6) |
B | NDK | e4s0mB1 | A: a+b two layers | X: Alpha-beta plaits | H: Nucleoside diphosphate kinases (From Topology) | T: Nucleoside diphosphate kinases | F: NDK | ECOD (1.6) |
C | NDK | e4s0mC1 | A: a+b two layers | X: Alpha-beta plaits | H: Nucleoside diphosphate kinases (From Topology) | T: Nucleoside diphosphate kinases | F: NDK | ECOD (1.6) |
D | NDK | e4s0mD1 | A: a+b two layers | X: Alpha-beta plaits | H: Nucleoside diphosphate kinases (From Topology) | T: Nucleoside diphosphate kinases | F: NDK | ECOD (1.6) |
E [auth F] | NDK | e4s0mF1 | A: a+b two layers | X: Alpha-beta plaits | H: Nucleoside diphosphate kinases (From Topology) | T: Nucleoside diphosphate kinases | F: NDK | ECOD (1.6) |
F [auth G] | NDK | e4s0mG1 | A: a+b two layers | X: Alpha-beta plaits | H: Nucleoside diphosphate kinases (From Topology) | T: Nucleoside diphosphate kinases | F: NDK | ECOD (1.6) |
G [auth H] | NDK | e4s0mH1 | A: a+b two layers | X: Alpha-beta plaits | H: Nucleoside diphosphate kinases (From Topology) | T: Nucleoside diphosphate kinases | F: NDK | ECOD (1.6) |
H [auth I] | NDK | e4s0mI1 | A: a+b two layers | X: Alpha-beta plaits | H: Nucleoside diphosphate kinases (From Topology) | T: Nucleoside diphosphate kinases | F: NDK | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00334 | Nucleoside diphosphate kinase (NDK) | Nucleoside diphosphate kinase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023005 | Nucleoside diphosphate kinase, active site | Active Site | |
IPR034907 | Nucleoside diphosphate kinase-like domain | Domain | |
IPR036850 | Nucleoside diphosphate kinase-like domain superfamily | Homologous Superfamily | |
IPR001564 | Nucleoside diphosphate kinase | Family |