Crystal Structure of the N-terminal domain of Moloney murine leukemia virus integrase, Northeast Structural Genomics Consortium Target OR3
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | N-terminal Zn binding domain of HIV integrase-like | 8091479 | 3001203 | SCOP2B (2021-05-27) |
B | SCOP2 Family | N-terminal Zn-binding domain of M-MuLV integrase | 8046049 | 4004842 | SCOP2 (2021-05-27) |
B | SCOP2 Superfamily | N-terminal Zn binding domain of HIV integrase-like | 8091479 | 3001203 | SCOP2 (2021-05-27) |
C | SCOP2B Superfamily | N-terminal Zn binding domain of HIV integrase-like | 8091479 | 3001203 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | N-terminal Zn binding domain of HIV integrase-like | 8091479 | 3001203 | SCOP2B (2021-05-27) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF16721 | e4nzgA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF16721 | ECOD (1.6) |
B | PF16721 | e4nzgB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF16721 | ECOD (1.6) |
C | PF16721 | e4nzgC1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF16721 | ECOD (1.6) |
D | PF16721 | e4nzgD1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF16721 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| Integrase p46 | | | |
Chains | Accession | Name | Type |
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| IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
| IPR040643 | Murine leukemia virus integrase, C-terminal | Domain |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | Homologous Superfamily |
| IPR001995 | Peptidase A2A, retrovirus, catalytic | Domain |
| IPR001878 | Zinc finger, CCHC-type | Domain |
| IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily |
| IPR010999 | Retroviral matrix protein | Homologous Superfamily |
| IPR021109 | Aspartic peptidase domain superfamily | Homologous Superfamily |
| IPR002079 | Gag polyprotein, inner coat protein p12 | Domain |
| IPR001969 | Aspartic peptidase, active site | Active Site |
| IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |
| IPR018061 | Retropepsins | Domain |
| IPR002156 | Ribonuclease H domain | Domain |
| IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
| IPR000840 | Gamma-retroviral matrix protein | Domain |
| IPR001584 | Integrase, catalytic core | Domain |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain | Domain |
| IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily |
| IPR000477 | Reverse transcriptase domain | Domain |
| IPR036946 | Gamma-retroviral matrix domain superfamily | Homologous Superfamily |
| IPR039464 | Gag-Pol polyprotein, Zinc-finger like domain | Domain |
| IPR003036 | Core shell protein Gag P30 | Domain |