4NUU
Heterotrimer structure of Region II from Plasmodium vivax Duffy Binding Protein (PvDBP) bound to the ectodomain of the Duffy Antigen Receptor for Chemokines (DARC)
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4nuua1 | All alpha proteins | Duffy binding domain-like | Duffy binding domain-like | Duffy binding domain | automated matches | (Plasmodium vivax Sal-1 ) [TaxId: 126793 ], | SCOPe (2.08) |
A | d4nuua2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Plasmodium vivax Sal-1 ) [TaxId: 126793 ], | SCOPe (2.08) |
B | d4nuub1 | All alpha proteins | Duffy binding domain-like | Duffy binding domain-like | Duffy binding domain | automated matches | (Plasmodium vivax Sal-1 ) [TaxId: 126793 ], | SCOPe (2.08) |
B | d4nuub2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Plasmodium vivax Sal-1 ) [TaxId: 126793 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Duffy_binding | e4nuuA1 | A: alpha bundles | X: Duffy-binding-like domain, N-terminal subdomain (From Topology) | H: Duffy-binding-like domain, N-terminal subdomain (From Topology) | T: Duffy-binding-like domain, N-terminal subdomain | F: Duffy_binding | ECOD (1.6) |
A | PTZ00176 | e4nuuA2 | A: alpha bundles | X: Duffy-binding-like domain, C-terminal subdomain (From Topology) | H: Duffy-binding-like domain, C-terminal subdomain (From Topology) | T: Duffy-binding-like domain, C-terminal subdomain | F: PTZ00176 | ECOD (1.6) |
B | Duffy_binding | e4nuuB1 | A: alpha bundles | X: Duffy-binding-like domain, N-terminal subdomain (From Topology) | H: Duffy-binding-like domain, N-terminal subdomain (From Topology) | T: Duffy-binding-like domain, N-terminal subdomain | F: Duffy_binding | ECOD (1.6) |
B | PTZ00176 | e4nuuB2 | A: alpha bundles | X: Duffy-binding-like domain, C-terminal subdomain (From Topology) | H: Duffy-binding-like domain, C-terminal subdomain (From Topology) | T: Duffy-binding-like domain, C-terminal subdomain | F: PTZ00176 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1310.20 | Mainly Alpha | Up-down Bundle | 5 helical Cullin repeat like | Duffy-antigen binding domain | CATH (4.3.0) |
A | 1.20.58.830 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
B | 1.20.1310.20 | Mainly Alpha | Up-down Bundle | 5 helical Cullin repeat like | Duffy-antigen binding domain | CATH (4.3.0) |
B | 1.20.58.830 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05424 | Duffy binding domain (Duffy_binding) | Duffy binding domain | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR043057 | Erythrocyte binding antigen 175, C-terminal domain superfamily | Homologous Superfamily | |
IPR008602 | Duffy-antigen binding domain | Domain | |
IPR021620 | Erythrocyte binding antigen 175, C-terminal | Domain | |
IPR021015 | Duffy-antigen binding, C-terminal | Domain | |
IPR042202 | Duffy-antigen binding superfamily | Homologous Superfamily | |
IPR021032 | Duffy-antigen binding, N-terminal | Domain | |
IPR005384 | Duffy antigen/chemokine receptor | Family |