Crystal Structure of a Computationally Designed RSV-Presenting Epitope Scaffold And Its Elicited Antibody 17HD9


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth N]MreCe4n9gN1 A: beta barrelsX: DEATH domainH: HTHT: winged helix domainF: MreCECOD (v294.2)
H [auth L]MreCe4n9gL1 A: beta barrelsX: DEATH domainH: HTHT: winged helix domainF: MreCECOD (v294.2)
FMreCe4n9gF1 A: beta barrelsX: DEATH domainH: HTHT: winged helix domainF: MreCECOD (v294.2)
BNusG_IIe4n9gB1 A: beta barrelsX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: NusG_IIECOD (v294.2)
I [auth M]MreCe4n9gM1 A: beta barrelsX: DEATH domainH: HTHT: winged helix domainF: MreCECOD (v294.2)
G [auth H]MreCe4n9gH1 A: beta barrelsX: DEATH domainH: HTHT: winged helix domainF: MreCECOD (v294.2)
EMreCe4n9gE1 A: beta barrelsX: DEATH domainH: HTHT: winged helix domainF: MreCECOD (v294.2)
ANusG_IIe4n9gA1 A: beta barrelsX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: NusG_IIECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B,
F,
H [auth L],
J [auth N]
17HD9 Fab L-KAPPA Homo sapiens (human) IGKV1-16*01, IGKJ1*01, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202618-0)
A,
E,
G [auth H],
I [auth M]
17HD9 Fab VH-CH1 Homo sapiens (human) IGHV4-34*09, IGHV4-59*01, IGHV4-59*02, IGHV4-59*08, IGHV4-4*08, IGHJ3*01, IGHG1*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202618-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B,
F,
H [auth L],
J [auth N]
Light ChainIGKV1 Kappaepitope scaffold rsv_1isea_ffl_001_cSAbDab (2026-05-15)
A,
E,
G [auth H],
I [auth M]
Heavy ChainIGHV4 -epitope scaffold rsv_1isea_ffl_001_cSAbDab (2026-05-15)