Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF22120e4n88A1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF22120ECOD (1.6)
APF22115e4n88A2 A: a+b complex topologyX: Lysozyme-like (From Homology)H: Lysozyme-likeT: Lysozyme-likeF: PF22115ECOD (1.6)
CPF22120e4n88C1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF22120ECOD (1.6)
CPF22115e4n88C2 A: a+b complex topologyX: Lysozyme-like (From Homology)H: Lysozyme-likeT: Lysozyme-likeF: PF22115ECOD (1.6)
BPF22211e4n88B1 A: a+b three layersX: Mog1p/PsbP-likeH: Mog1p/PsbP-like (From Topology)T: Mog1p/PsbP-likeF: PF22211ECOD (1.6)
DPF22211e4n88D1 A: a+b three layersX: Mog1p/PsbP-likeH: Mog1p/PsbP-like (From Topology)T: Mog1p/PsbP-likeF: PF22211ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.1690 Mainly Beta Sandwich Jelly Rolls CATH (4.2.0)
D2.60.120.1690 Mainly Beta Sandwich Jelly Rolls CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF22115T6SS, Peptidoglycan muramidase Tse3, catalytic domain (T6SS_Tse3_cat)T6SS, Peptidoglycan muramidase Tse3, catalytic domainThis domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades ...This domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades peptidoglycan via muramidase activity. It is organised into a small N-terminal domain with a C-terminal catalytic domain (this entry), which contains two major lobes that form an an open, accessible catalytic groove with three calcium-binding ions [1-3].
Domain
A, C
PF22120T6SS, Peptidoglycan muramidase Tse3, N-terminal domain (T6SS_Tse3_N)T6SS, Peptidoglycan muramidase Tse3, N-terminal domainThis domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades ...This domain is found in Peptidoglycan muramidase Tse3 from Pseudomonas aeruginosa and similar sequences from bacteria. Tse3 is a toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. This protein degrades peptidoglycan via muramidase activity. It is organised into a small N-terminal domain (this entry), which contains seven alpha-helices packed in a rod-like helical repeat motif, and a C-terminal catalytic domain (Pfam:PF22115) [1-3].
Domain
B, D
PF22211Type six secretion immunity 3 domain (Tsi3)Type six secretion immunity 3 domainThis entry represents the Tsi3 domain. Tsi3 immunity protein prevents early activation of toxin Tse3. Three loops of Tsi3 deeply insert into the groove of Tse3, fully blocking its active site. This interaction serves as the structural basis for Tse3 ...This entry represents the Tsi3 domain. Tsi3 immunity protein prevents early activation of toxin Tse3. Three loops of Tsi3 deeply insert into the groove of Tse3, fully blocking its active site. This interaction serves as the structural basis for Tse3 inactivation [1,2,3].
Domain