4K50
Rhinovirus 16 polymerase elongation complex (r1_form)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth E] | d4k50e_ | Multi-domain proteins (alpha and beta) | DNA/RNA polymerases | DNA/RNA polymerases | RNA-dependent RNA-polymerase | Viral RNA polymerase | HRV-16 (rhinovirus A16 ) [TaxId: 31708 ], | SCOPe (2.08) |
G [auth I] | d4k50i_ | Multi-domain proteins (alpha and beta) | DNA/RNA polymerases | DNA/RNA polymerases | RNA-dependent RNA-polymerase | automated matches | HRV-16 (rhinovirus A16 ) [TaxId: 31708 ], | SCOPe (2.08) |
J [auth M] | d4k50m_ | Multi-domain proteins (alpha and beta) | DNA/RNA polymerases | DNA/RNA polymerases | RNA-dependent RNA-polymerase | Viral RNA polymerase | HRV-16 (rhinovirus A16 ) [TaxId: 31708 ], | SCOPe (2.08) |
A | d4k50a_ | Multi-domain proteins (alpha and beta) | DNA/RNA polymerases | DNA/RNA polymerases | RNA-dependent RNA-polymerase | Viral RNA polymerase | HRV-16 (rhinovirus A16 ) [TaxId: 31708 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth E] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8044134 | 3001272 | SCOP2B (2021-05-27) |
D [auth E] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8044134 | 3001272 | SCOP2B (2021-05-27) |
G [auth I] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8044134 | 3001272 | SCOP2B (2021-05-27) |
G [auth I] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8044134 | 3001272 | SCOP2B (2021-05-27) |
J [auth M] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8044134 | 3001272 | SCOP2B (2021-05-27) |
J [auth M] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8044134 | 3001272 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8044134 | 3001272 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8044134 | 3001272 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth E] | F_UNCLASSIFIED | e4k50E1 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth E] | PF00680 | e4k50E2 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00680 | ECOD (1.6) |
G [auth I] | F_UNCLASSIFIED | e4k50I1 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: F_UNCLASSIFIED | ECOD (1.6) |
G [auth I] | PF00680 | e4k50I2 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00680 | ECOD (1.6) |
J [auth M] | F_UNCLASSIFIED | e4k50M1 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: F_UNCLASSIFIED | ECOD (1.6) |
J [auth M] | PF00680 | e4k50M2 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00680 | ECOD (1.6) |
A | F_UNCLASSIFIED | e4k50A1 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00680 | e4k50A2 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00680 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth E], G [auth I], J [auth M] | PF00680 | Viral RNA-dependent RNA polymerase (RdRP_1) | Viral RNA-dependent RNA polymerase | - | Family |