Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyOuter-membrane protein Omp85-like 8048568 4006144 SCOP2 (2022-06-29)
ASCOP2 FamilyPOTRA domain-like 8049235 4006413 SCOP2 (2022-06-29)
ASCOP2 FamilyPOTRA domain-like 8052236 4006413 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPorins 8052234 3000224 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPOTRA domain-like 8052237 3002100 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPOTRA domain-like 8052238 3002100 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ABac_surface_Age4k3cA3 A: beta barrelsX: Outer membrane meander beta-barrelsH: PorinsT: PorinF: Bac_surface_AgECOD (1.6)
APOTRAe4k3cA4 A: a+b duplicates or obligate multimersX: Polypeptide transport-associated (POTRA) domain (From Topology)H: Polypeptide transport-associated (POTRA) domain (From Topology)T: Polypeptide transport-associated (POTRA) domainF: POTRAECOD (1.6)
APOTRA_5e4k3cA2 A: a+b duplicates or obligate multimersX: Polypeptide transport-associated (POTRA) domain (From Topology)H: Polypeptide transport-associated (POTRA) domain (From Topology)T: Polypeptide transport-associated (POTRA) domainF: POTRA_5ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.20.310 Alpha Beta Roll Ubiquitin-like (UB roll) membrane protein fhacCATH (4.3.0)
A2.40.160.50 Mainly Beta Beta Barrel Porin membrane protein fhac: a member of the omp85/tpsb transporter familyCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07244Surface antigen variable number repeat (POTRA)Surface antigen variable number repeatThis family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members ...This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure.
Domain
PF01103Omp85 superfamily domain (Omp85)Omp85 superfamily domainThe Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA fro ...The Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA from E. coli.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage