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 4ID9 | pdb_00004id9

Crystal structure of a short-chain dehydrogenase/reductase superfamily protein from agrobacterium tumefaciens (TARGET EFI-506441) with bound nad, monoclinic form 1

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilyUDP-glucose 4-epimerase GalE-lke 8085011 4000088 SCOP2 (2022-06-29)
BSCOP2 SuperfamilySDR-like 8085012 3000038 SCOP2 (2022-06-29)
ASCOP2B SuperfamilySDR-like 8085012 3000038 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPeptidase_M4,Peptidase_M4_Ce4id9B1 A: alpha arraysX: GIY-YIG endonucleaseH: GIY-YIG endonucleaseT: GIY-YIG endonucleaseF: Peptidase_M4,Peptidase_M4_CECOD (v295.2)
AFtsJe4id9A1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: FtsJECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
B3.90.25.60 Alpha Beta Alpha-Beta Complex UDP-galactose 4-epimerase domain 1CATH (4.3.0)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
A3.90.25.60 Alpha Beta Alpha-Beta Complex UDP-galactose 4-epimerase domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01370NAD dependent epimerase/dehydratase family (Epimerase)NAD dependent epimerase/dehydratase family- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR050177Bifunctional lipid A modification and metabolic enzymesFamily
A, B
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
A, B
IPR001509NAD-dependent epimerase/dehydrataseDomain