Structure of the spinach aquaporin SoPIP2;1 at pH 6
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d4ia4d_ | Membrane and cell surface proteins and peptides | Aquaporin-like | Aquaporin-like | automated matches | automated matches | Spinach (Spinacia oleracea ) [TaxId: 3562 ], | SCOPe (2.08) |
| C | d4ia4c_ | Membrane and cell surface proteins and peptides | Aquaporin-like | Aquaporin-like | automated matches | automated matches | Spinach (Spinacia oleracea ) [TaxId: 3562 ], | SCOPe (2.08) |
| B | d4ia4b_ | Membrane and cell surface proteins and peptides | Aquaporin-like | Aquaporin-like | automated matches | automated matches | Spinach (Spinacia oleracea ) [TaxId: 3562 ], | SCOPe (2.08) |
| A | d4ia4a_ | Membrane and cell surface proteins and peptides | Aquaporin-like | Aquaporin-like | automated matches | automated matches | Spinach (Spinacia oleracea ) [TaxId: 3562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | Aquaporin-like | 8072772 | 3000508 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Aquaporin-like | 8072772 | 3000508 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Aquaporin-like | 8072772 | 3000508 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Aquaporin-like | 8072772 | 3000508 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Peripla_BP_3 | e4ia4D2 | A: alpha arrays | X: DEATH domain | H: PH domain-like | T: PH domain-like | F: Peripla_BP_3 | ECOD (v295.2) |
| C | Avidin | e4ia4C1 | A: alpha arrays | X: Major vault protein (MVP) structural repeat domain | H: Major vault protein (MVP) structural repeat domain | T: Major vault protein (MVP) structural repeat domain | F: Avidin | ECOD (v295.2) |
| B | Peripla_BP_3 | e4ia4B2 | A: alpha arrays | X: DEATH domain | H: PH domain-like | T: PH domain-like | F: Peripla_BP_3 | ECOD (v295.2) |
| A | Peripla_BP_3 | e4ia4A2 | A: alpha arrays | X: DEATH domain | H: PH domain-like | T: PH domain-like | F: Peripla_BP_3 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 1.20.1080.10 | Mainly Alpha | Up-down Bundle | Glycerol uptake facilitator protein | Glycerol uptake facilitator protein. | CATH (4.3.0) |
| C | 1.20.1080.10 | Mainly Alpha | Up-down Bundle | Glycerol uptake facilitator protein | Glycerol uptake facilitator protein. | CATH (4.3.0) |
| B | 1.20.1080.10 | Mainly Alpha | Up-down Bundle | Glycerol uptake facilitator protein | Glycerol uptake facilitator protein. | CATH (4.3.0) |
| A | 1.20.1080.10 | Mainly Alpha | Up-down Bundle | Glycerol uptake facilitator protein | Glycerol uptake facilitator protein. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Aquaporin | - |