C-alpha backbone trace of major capsid protein gp39 found in marine virus Syn5.
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G | Cyclin_N | e4bmlG1 | A: beta barrels | X: HTH | H: Toll/Interleukin receptor TIR domain | T: Toll/Interleukin receptor TIR domain | F: Cyclin_N | ECOD (v294.2) |
| F | Cyclin_N | e4bmlF1 | A: beta barrels | X: HTH | H: Toll/Interleukin receptor TIR domain | T: Toll/Interleukin receptor TIR domain | F: Cyclin_N | ECOD (v294.2) |
| E | Hemagglutinin | e4bmlE1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Hemagglutinin | ECOD (v294.2) |
| D | Cyclin_N | e4bmlD1 | A: beta barrels | X: HTH | H: Toll/Interleukin receptor TIR domain | T: Toll/Interleukin receptor TIR domain | F: Cyclin_N | ECOD (v294.2) |
| C | Cyclin_N | e4bmlC1 | A: beta barrels | X: HTH | H: Toll/Interleukin receptor TIR domain | T: Toll/Interleukin receptor TIR domain | F: Cyclin_N | ECOD (v294.2) |
| B | Cyclin_N | e4bmlB1 | A: beta barrels | X: HTH | H: Toll/Interleukin receptor TIR domain | T: Toll/Interleukin receptor TIR domain | F: Cyclin_N | ECOD (v294.2) |
| A | Cyclin_N | e4bmlA1 | A: beta barrels | X: HTH | H: Toll/Interleukin receptor TIR domain | T: Toll/Interleukin receptor TIR domain | F: Cyclin_N | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF21703 | Major capsid protein (Gp10A-like) | Major capsid protein | This protein family includes Major capsid protein from Bacteriophage T7 (Gp10A) and similar proteins from tailed bacteriophages and bacterial prophages. Gp10A subunits adopt an HK97-like conformation to form the viral shell [2]. | Domain |
