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 4BML | pdb_00004bml

C-alpha backbone trace of major capsid protein gp39 found in marine virus Syn5.

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
GCyclin_Ne4bmlG1 A: alpha arraysX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (v295.2)
FCyclin_Ne4bmlF1 A: alpha arraysX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (v295.2)
EHemagglutinine4bmlE1 A: alpha arraysX: HTHH: HTHT: winged helix domainF: HemagglutininECOD (v295.2)
DCyclin_Ne4bmlD1 A: alpha arraysX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (v295.2)
CCyclin_Ne4bmlC1 A: alpha arraysX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (v295.2)
BCyclin_Ne4bmlB1 A: alpha arraysX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (v295.2)
ACyclin_Ne4bmlA1 A: alpha arraysX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF21703Major capsid protein (Gp10A-like)Major capsid proteinThis protein family includes Major capsid protein from Bacteriophage T7 (Gp10A) and similar proteins from tailed bacteriophages and bacterial prophages. Gp10A subunits adopt an HK97-like conformation to form the viral shell [2]. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR049301Capsid Gp10A/Gp10B-like domainDomain