4B30
Structure of the mutant V44A of the fluorescent protein KillerRed
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4b30a_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Anthomedusae sp. DC-2005 ) [TaxId: 328397 ], | SCOPe (2.08) |
B | d4b30b_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Anthomedusae sp. DC-2005 ) [TaxId: 328397 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01353 | e4b30A1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
B | PF01353 | e4b30B1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
B | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01353 | Green fluorescent protein (GFP) | Green fluorescent protein | - | Domain | |
PF01353 | Green fluorescent protein (GFP) | Green fluorescent protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
KILLERRED | - | - | ||
KILLERRED | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000786 | Green fluorescent protein, GFP | Family | |
IPR011584 | Green fluorescent protein-related | Family | |
IPR009017 | Green fluorescent protein | Homologous Superfamily | |
IPR000786 | Green fluorescent protein, GFP | Family | |
IPR011584 | Green fluorescent protein-related | Family | |
IPR009017 | Green fluorescent protein | Homologous Superfamily |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
CRQ | Parent Component: GLN, TYR, GLY :  AA0189 :  2-imino-glutamine 5-imidazolinone glycine MOD:00197 | |
CSO | Parent Component: CYS :  AA0189 , AA0205 :  2-imino-glutamine 5-imidazolinone glycine MOD:00197 , L-cysteine sulfenic acid MOD:00210 | |
CRQ | Parent Component: GLN, TYR, GLY :  AA0189 , AA0205 , AA0189 :  2-imino-glutamine 5-imidazolinone glycine MOD:00197 , L-cysteine sulfenic acid MOD:00210 , 2-imino-glutamine 5-imidazolinone glycine MOD:00197 | |
CSO | Parent Component: CYS :  AA0189 , AA0205 , AA0189 , AA0205 :  2-imino-glutamine 5-imidazolinone glycine MOD:00197 , L-cysteine sulfenic acid MOD:00210 , 2-imino-glutamine 5-imidazolinone glycine MOD:00197 , L-cysteine sulfenic acid MOD:00210 |