4ADI
Crystal structure of the Rubella virus envelope glycoprotein E1 in post-fusion form (crystal form I)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Rubella_E1_2nd | e4adiA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Rubella_E1_2nd | ECOD (1.6) |
A | Rubella_E1_1st | e4adiA1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Rubella_E1_1st | ECOD (1.6) |
B | Rubella_E1_2nd | e4adiB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Rubella_E1_2nd | ECOD (1.6) |
B | Rubella_E1_1st | e4adiB2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Rubella_E1_1st | ECOD (1.6) |
C | Rubella_E1_2nd | e4adiC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Rubella_E1_2nd | ECOD (1.6) |
C | Rubella_E1_1st | e4adiC1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Rubella_E1_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.98.30 | Mainly Beta | Sandwich | Tick-borne Encephalitis virus Glycoprotein | domain 1 | CATH (4.3.0) |
A | 3.30.67.20 | Alpha Beta | 2-Layer Sandwich | Viral Envelope Glycoprotein | domain 2 | CATH (4.3.0) |
A | 2.60.40.2650 | Mainly Beta | Sandwich | Immunoglobulin-like | Rubella membrane glycoprotein E1, domain 3 | CATH (4.3.0) |
B | 2.60.98.30 | Mainly Beta | Sandwich | Tick-borne Encephalitis virus Glycoprotein | domain 1 | CATH (4.3.0) |
B | 3.30.67.20 | Alpha Beta | 2-Layer Sandwich | Viral Envelope Glycoprotein | domain 2 | CATH (4.3.0) |
B | 2.60.40.2650 | Mainly Beta | Sandwich | Immunoglobulin-like | Rubella membrane glycoprotein E1, domain 3 | CATH (4.3.0) |
C | 2.60.98.30 | Mainly Beta | Sandwich | Tick-borne Encephalitis virus Glycoprotein | domain 1 | CATH (4.3.0) |
C | 3.30.67.20 | Alpha Beta | 2-Layer Sandwich | Viral Envelope Glycoprotein | domain 2 | CATH (4.3.0) |
C | 2.60.40.2650 | Mainly Beta | Sandwich | Immunoglobulin-like | Rubella membrane glycoprotein E1, domain 3 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR042498 | Rubella membrane glycoprotein E1, domain 2 | Homologous Superfamily | |
IPR008820 | Rubella membrane glycoprotein E1 | Family | |
IPR042500 | Rubella membrane glycoprotein E1, domain 1 | Homologous Superfamily | |
IPR043106 | Rubella capsid domain superfamily | Homologous Superfamily | |
IPR008821 | Rubella membrane glycoprotein E2 | Domain | |
IPR008819 | Rubella capsid | Family | |
IPR042499 | Rubella membrane glycoprotein E1, domain 3 | Homologous Superfamily |