4ZPQ
Crystal Structure of Protocadherin Gamma C5 EC1-3
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cadherin-like | 8091938 | 3002049 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Cadherin-like | 8091940 | 3002049 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Cadherin-like | 8091939 | 3002049 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cadherin-like | 8091938 | 3002049 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cadherin-like | 8091939 | 3002049 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cadherin-like | 8091940 | 3002049 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cadherin-like | 8091939 | 3002049 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cadherin-like | 8091938 | 3002049 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cadherin-like | 8091940 | 3002049 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00028 | e4zpqA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00028 | ECOD (1.6) |
A | PF08266 | e4zpqA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08266 | ECOD (1.6) |
B | PF00028 | e4zpqB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00028 | ECOD (1.6) |
B | PF08266 | e4zpqB3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08266 | ECOD (1.6) |
C | PF00028 | e4zpqC3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00028 | ECOD (1.6) |
C | PF08266 | e4zpqC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08266 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
B | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
C | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00028 | Cadherin domain (Cadherin) | Cadherin domain | - | Domain | |
PF08266 | Cadherin-like (Cadherin_2) | Cadherin-like | This cadherin domain is usually the most N-terminal copy of the domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR031904 | Cadherin, C-terminal catenin-binding domain | Domain | |
IPR032455 | Cadherin, cytoplasmic C-terminal domain | Domain | |
IPR050174 | Protocadherin/Cadherin-related Cell Adhesion | Family | |
IPR013164 | Cadherin, N-terminal | Domain | |
IPR015919 | Cadherin-like superfamily | Homologous Superfamily | |
IPR020894 | Cadherin conserved site | Conserved Site | |
IPR002126 | Cadherin-like | Domain |