4ZLT
Crystal structure of viral chemokine binding protein R17 in complex with CCL3
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth F] | d4zltf_ | Alpha and beta proteins (a+b) | IL8-like | Interleukin 8-like chemokines | automated matches | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
D [auth L] | d4zltl_ | Alpha and beta proteins (a+b) | IL8-like | Interleukin 8-like chemokines | automated matches | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth F] | SCOP2 Family | Interleukin 8-like chemokines | 8061434 | 4000912 | SCOP2 (2021-05-27) |
C [auth F] | SCOP2 Superfamily | Interleukin 8-like chemokines | 8061435 | 3001955 | SCOP2 (2021-05-27) |
D [auth L] | SCOP2B Superfamily | Interleukin 8-like chemokines | 8061435 | 3001955 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | F_UNCLASSIFIED | e4zltB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Viral chemokine binding protein m3 (From Topology) | T: Viral chemokine binding protein m3 | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth A] | F_UNCLASSIFIED | e4zltA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Viral chemokine binding protein m3 (From Topology) | T: Viral chemokine binding protein m3 | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth F] | PF00048 | e4zltF1 | A: beta barrels | X: IL8-related (From Homology) | H: IL8-related | T: IL8 | F: PF00048 | ECOD (1.6) |
D [auth L] | PF00048 | e4zltL1 | A: beta barrels | X: IL8-related (From Homology) | H: IL8-related | T: IL8 | F: PF00048 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth F] | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
D [auth L] | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth F], D [auth L] | PF00048 | Small cytokines (intecrine/chemokine), interleukin-8 like (IL8) | Small cytokines (intecrine/chemokine), interleukin-8 like | Includes a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity. Structure contains two highly conserved disulfide bonds. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth F], D [auth L] | IPR001811 | Chemokine interleukin-8-like domain | Domain |
C [auth F], D [auth L] | IPR000827 | CC chemokine, conserved site | Conserved Site |
C [auth F], D [auth L] | IPR036048 | Chemokine interleukin-8-like superfamily | Homologous Superfamily |
C [auth F], D [auth L] | IPR039809 | Chemokine beta/gamma/delta | Family |