4ZGN
Structure Cdc123 complexed with the C-terminal domain of eIF2gamma
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | D123 | e4zgnA1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: D123 | ECOD (1.6) |
B | eIF2_C | e4zgnB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Aminomethyltransferase beta-barrel domain | F: eIF2_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.40.30.10 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07065 | D123 (D123) | D123 | - | Family | |
PF09173 | Initiation factor eIF2 gamma, C terminal (eIF2_C) | Initiation factor eIF2 gamma, C terminal | Members of this family, which are found in the initiation factors eIF2 and EF-Tu, adopt a structure consisting of a beta barrel with Greek key topology. They are required for formation of the ternary complex with GTP and initiator tRNA [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009772 | Cell division cycle protein 123 | Family | |
IPR000795 | Translational (tr)-type GTP-binding domain | Domain | |
IPR009001 | Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal | Homologous Superfamily | |
IPR004161 | Translation elongation factor EFTu-like, domain 2 | Domain | |
IPR050543 | Eukaryotic Initiation Factor 2 Gamma Subunit | Family | |
IPR044128 | Initiation factor eIF2 gamma, GTP-binding domain | Domain | |
IPR015256 | Initiation factor eIF2 gamma, C-terminal | Domain | |
IPR009000 | Translation protein, beta-barrel domain superfamily | Homologous Superfamily | |
IPR044127 | Initiation factor eIF2 gamma, domain 2 | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |