4Z8K
Phycocyanin structure from T. elongatus at 2.5-A from XFEL using a viscous delivery medium for serial femtosecond crystallography
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4z8ka_ | All alpha proteins | Globin-like | Globin-like | Phycocyanin-like phycobilisome proteins | Phycocyanin alpha subunit | (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], | SCOPe (2.08) |
B | d4z8kb_ | All alpha proteins | Globin-like | Globin-like | Phycocyanin-like phycobilisome proteins | Phycocyanin beta subunit | (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Phycobilisome | e4z8kA1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Phycobilisome | ECOD (1.6) |
B | Phycobilisome | e4z8kB1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Phycobilisome | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.490.20 | Mainly Alpha | Orthogonal Bundle | Globin-like | Phycocyanins | CATH (4.3.0) |
B | 1.10.490.20 | Mainly Alpha | Orthogonal Bundle | Globin-like | Phycocyanins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00502 | Phycobilisome protein (Phycobilisome) | Phycobilisome protein | - | Domain | |
PF00502 | Phycobilisome protein (Phycobilisome) | Phycobilisome protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038719 | Phycobilisome, alpha/beta subunit superfamily | Homologous Superfamily | |
IPR006246 | Phycocyanin, alpha subunit | Family | |
IPR009050 | Globin-like superfamily | Homologous Superfamily | |
IPR012128 | Phycobilisome, alpha/beta subunit | Family | |
IPR038719 | Phycobilisome, alpha/beta subunit superfamily | Homologous Superfamily | |
IPR006247 | Phycocyanin, beta subunit | Family | |
IPR009050 | Globin-like superfamily | Homologous Superfamily | |
IPR012128 | Phycobilisome, alpha/beta subunit | Family |