4Z7K
Crystal structure of CRISPR RNA processing endoribonuclease Cas6b
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | CRISPR-associated proteins | 8103618 | 3001554 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | CRISPR-associated proteins | 8103618 | 3001554 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | DUF5328 | e4z7kB2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: DUF5328 | ECOD (1.6) |
A [auth B] | EUF08363 | e4z7kB1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: EUF08363 | ECOD (1.6) |
B [auth A] | DUF5328 | e4z7kA2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: DUF5328 | ECOD (1.6) |
B [auth A] | EUF08363 | e4z7kA1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: EUF08363 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF17262 | Cas6b C-terminal domain (Cas6b_C) | Cas6b C-terminal domain | Clustered, regularly interspaced, short palindromic repeat (CRISPR) loci play a pivotal role in the prokaryotic host defense system against invading genetic materials. The CRISPR loci are transcribed to produce CRISPR RNAs (crRNAs), which form interf ... | Domain |
A [auth B], B [auth A] | PF17955 | Cas6b N-terminal domain (Cas6b_N) | Cas6b N-terminal domain | Clustered, regularly interspaced, short palindromic repeat (CRISPR) loci play a pivotal role in the prokaryotic host defense system against invading genetic materials. The CRISPR loci are transcribed to produce CRISPR RNAs (crRNAs), which form interf ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], B [auth A] | Cas6b | - | - | |
RNA/DNA Hybrid (31-MER) | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR020209 | Cas6b, C-terminal domain | Domain |
A [auth B], B [auth A] | IPR041528 | Cas6b N-terminal | Domain |