4YX7
Complex of SpaO(SPOA1,2) and OrgB(APAR)::T4lysozyme fusion protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Surface presentation of antigens (SPOA) | 8098672 | 3001883 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Surface presentation of antigens (SPOA) | 8098672 | 3001883 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Lysozyme-like | 8033861 | 3001879 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Lysozyme-like | 8033861 | 3001879 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e4yx7A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Surface presentation of antigens (SPOA) | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e4yx7D1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Surface presentation of antigens (SPOA) | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF01052 | e4yx7B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Surface presentation of antigens (SPOA) | F: PF01052 | ECOD (1.6) |
E | PF01052 | e4yx7E1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Surface presentation of antigens (SPOA) | F: PF01052 | ECOD (1.6) |
C | PF00959 | e4yx7C1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: PF00959 | ECOD (1.6) |
F | PF00959 | e4yx7F1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: PF00959 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.30.330.10 | Mainly Beta | Roll | Surface presentation of antigens (SPOA) | SpoA-like | CATH (4.3.0) |
E | 2.30.330.10 | Mainly Beta | Roll | Surface presentation of antigens (SPOA) | SpoA-like | CATH (4.3.0) |
C | 1.10.530.40 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
F | 1.10.530.40 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01052 | Type III flagellar switch regulator (C-ring) FliN C-term (FliMN_C) | Type III flagellar switch regulator (C-ring) FliN C-term | - | Family | |
PF00959 | Phage lysozyme (Phage_lysozyme) | Phage lysozyme | This family includes lambda phage lysozyme and E. coli endolysin. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003283 | Type III secretion system outer membrane, SpaO | Family | |
IPR001543 | Flagellar motor switch protein FliN-like, C-terminal domain | Domain | |
IPR036429 | SpoA-like superfamily | Homologous Superfamily | |
IPR013385 | Type III secretion system apparatus protein YscQ/HrcQ/SpaO | Family | |
IPR003283 | Type III secretion system outer membrane, SpaO | Family | |
IPR001543 | Flagellar motor switch protein FliN-like, C-terminal domain | Domain | |
IPR036429 | SpoA-like superfamily | Homologous Superfamily | |
IPR013385 | Type III secretion system apparatus protein YscQ/HrcQ/SpaO | Family | |
IPR052619 | Bacteriophage lysozyme-like | Family | |
IPR001165 | T4-type lysozyme | Family | |
IPR034690 | Endolysin T4 type | Family | |
IPR002196 | Glycoside hydrolase, family 24 | Family | |
IPR023347 | Lysozyme domain superfamily | Homologous Superfamily | |
IPR023346 | Lysozyme-like domain superfamily | Homologous Superfamily |