Crystal structure of CapF with inhibitor 3-isopropenyl-tropolone
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e4yrdB1 | A: alpha arrays | X: C-terminal additional helical subdomain in reovirus polymerase lambda3 | H: C-terminal additional helical subdomain in reovirus polymerase lambda3 | T: C-terminal additional helical subdomain in reovirus polymerase lambda3 | F: | ECOD (v295.2) | |
| B | Ribosomal_S5_C | e4yrdB2 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Ribosomal_S5_C | ECOD (v295.2) |
| A | e4yrdA2 | A: alpha arrays | X: C-terminal additional helical subdomain in reovirus polymerase lambda3 | H: C-terminal additional helical subdomain in reovirus polymerase lambda3 | T: C-terminal additional helical subdomain in reovirus polymerase lambda3 | F: | ECOD (v295.2) | |
| A | Ribosomal_S5_C | e4yrdA3 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Ribosomal_S5_C | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| B | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
| A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050177 | Bifunctional lipid A modification and metabolic enzymes | Family | |
| IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
| IPR014710 | PpnP-like, jelly roll fold | Homologous Superfamily | |
| IPR029303 | Capsular polysaccharide assembling protein CapF, C-terminal domain | Domain | |
| IPR001509 | NAD-dependent epimerase/dehydratase | Domain | |
| IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily |