Annotations: 4YRD

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e4yrdB1	A: beta barrels	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F:	ECOD (v294.2)
B	Ribosomal_S5_C	e4yrdB2	A: beta barrels	X: HAD domain-like	H: Hemagglutinin HA2 chain	T: Hemagglutinin HA2 chain	F: Ribosomal_S5_C	ECOD (v294.2)
A		e4yrdA2	A: beta barrels	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F:	ECOD (v294.2)
A	Ribosomal_S5_C	e4yrdA3	A: beta barrels	X: HAD domain-like	H: Hemagglutinin HA2 chain	T: Hemagglutinin HA2 chain	F: Ribosomal_S5_C	ECOD (v294.2)

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
B	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
A	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
A	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Capsular polysaccharide synthesis enzyme Cap5F	cation binding ion binding binding metal ion binding small molecule binding	-	-

Chains	Accession	Name	Type
A, B	IPR050177	Bifunctional lipid A modification and metabolic enzymes	Family
A, B	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B	IPR029303	Capsular polysaccharide assembling protein CapF, C-terminal domain	Domain
A, B	IPR001509	NAD-dependent epimerase/dehydratase	Domain
A, B	IPR011051	RmlC-like cupin domain superfamily	Homologous Superfamily
A, B	IPR014710	RmlC-like jelly roll fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

4YRD | pdb_00004yrd