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 4YPJ | pdb_00004ypj

X-ray Structure of The Mutant of Glycoside Hydrolase

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilyE-set domains of sugar-utilizing enzymes 8045421 4007565 SCOP2 (2022-06-29)
BSCOP2 FamilyE-set domains of sugar-utilizing enzymes 8090593 4007565 SCOP2 (2022-06-29)
BSCOP2 Familybeta-Galactosidase N-terminal domain-like 8090595 4002476 SCOP2 (2022-06-29)
BSCOP2 Familybeta-Galactosidase/glucuronidase domain 8090597 4007531 SCOP2 (2022-06-29)
BSCOP2 Familybeta-glycanases 8090599 4003164 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyE set domains 8090592 3000070 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyE set domains 8090594 3000070 SCOP2 (2022-06-29)
BSCOP2 Superfamilygalactose-binding domain-like 8090596 3000087 SCOP2 (2022-06-29)
BSCOP2 Superfamilybeta-Galactosidase/glucuronidase domain-like 8090598 3002047 SCOP2 (2022-06-29)
BSCOP2 Superfamily(Trans)glycosidases 8090600 3000313 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyE set domains 8090594 3000070 SCOP2B (2022-06-29)
ASCOP2B Superfamilygalactose-binding domain-like 8090596 3000087 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyE set domains 8090592 3000070 SCOP2B (2022-06-29)
ASCOP2B Superfamilybeta-Galactosidase/glucuronidase domain-like 8090598 3002047 SCOP2B (2022-06-29)
ASCOP2B Superfamily(Trans)glycosidases 8090600 3000313 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BKH_2e4ypjB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: KH_2ECOD (v295.2)
AKH_2e4ypjA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: KH_2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Beta galactosidase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR032311Domain of unknown function DUF4982Domain
A, B
IPR051913Glycosyl Hydrolase 2 Domain-Containing ProteinFamily
A, B
IPR006102Glycoside hydrolase family 2, immunoglobulin-like beta-sandwichDomain
A, B
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B
IPR006101Glycoside hydrolase, family 2Family
A, B
IPR040605Glycoside hydrolase family 2, domain 5Domain
A, B
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
A, B
IPR036156Beta-Galactosidase/glucuronidase domain superfamilyHomologous Superfamily
A, B
IPR006104Glycosyl hydrolases family 2, sugar binding domainDomain
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR006103Glycoside hydrolase family 2, catalytic domainDomain
A, B
IPR049487Beta-galactosidase-like, galactose-binding domainDomain
A, B
IPR011081Bacterial Ig-like domainDomain
A, B
IPR008964Invasin/intimin cell-adhesion fragmentsHomologous Superfamily