4YJ1
Crystal structure of T. brucei MRB1590-ADP bound to poly-U RNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | MRB1590-like | 8045638 | 4004584 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ABC transporter-like P-loop ATPases | 8091265 | 3002020 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | MRB1590 N-terminal domain-like | 8091266 | 3002491 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | MRB1590 C-terminal domain-like | 8091267 | 3002492 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | COG3044 | e4yj1A3 | A: alpha arrays | X: HTH | H: MRB1590 C-terminal domain (From Topology) | T: MRB1590 C-terminal domain | F: COG3044 | ECOD (1.6) |
A | ABC_ATPase_N | e4yj1A2 | A: a+b two layers | X: Type III secretory system chaperone-like | H: MRB1590 N-terminal domain (From Topology) | T: MRB1590 N-terminal domain | F: ABC_ATPase_N | ECOD (1.6) |
A | ABC_ATPase_C | e4yj1A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_ATPase_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09818 | P-loop domain (ABC_ATPase) | P-loop domain | This is the C-terminal ATPase domain from bacterial ABC class ATPases. This entry also includes MRB1590 (Swiss:Q57ZF2) from Trypanosoma brucei brucei has a central ATPase domain homologous to this domain [1]. | Domain | |
PF20446 | ATPase of the ABC class N-terminal (ABC_N) | ATPase of the ABC class N-terminal | This is the N-terminal domain of various bacterial predicted ABC class ATPases which shows sequence and structural similarities to the N-terminal domain of MRB1590 (swiss:Q57ZF2) from kinetoplastids, a core protein of the multiprotein mitochondrial R ... | Domain | |
PF21117 | MRB1590 C-terminal domain (MRB1590_C) | MRB1590 C-terminal domain | This entry represents the C-terminal helix-turn-helix like domain from the T. brucei kRNA editing factor MRB1590 [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR046834 | ATPase of the ABC class, C-terminal | Domain | |
IPR046833 | ATPase of the ABC class, N-terminal | Domain | |
IPR049069 | MRB1590-like, C-terminal domain | Domain | |
IPR019195 | ABC transporter, ATPase, putative | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |