4YIY
Structure of MRB1590 bound to AMP-PNP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | MRB1590 C-terminal domain-like | 8091267 | 3002492 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | MRB1590 N-terminal domain-like | 8091266 | 3002491 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8091265 | 3002020 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | MRB1590 N-terminal domain-like | 8091266 | 3002491 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | MRB1590 C-terminal domain-like | 8091267 | 3002492 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8091265 | 3002020 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | COG3044 | e4yiyB3 | A: alpha arrays | X: HTH | H: MRB1590 C-terminal domain (From Topology) | T: MRB1590 C-terminal domain | F: COG3044 | ECOD (1.6) |
A [auth B] | ABC_ATPase_N | e4yiyB1 | A: a+b two layers | X: Type III secretory system chaperone-like | H: MRB1590 N-terminal domain (From Topology) | T: MRB1590 N-terminal domain | F: ABC_ATPase_N | ECOD (1.6) |
A [auth B] | ABC_ATPase_C | e4yiyB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_ATPase_C | ECOD (1.6) |
B [auth A] | COG3044 | e4yiyA1 | A: alpha arrays | X: HTH | H: MRB1590 C-terminal domain (From Topology) | T: MRB1590 C-terminal domain | F: COG3044 | ECOD (1.6) |
B [auth A] | ABC_ATPase_N | e4yiyA2 | A: a+b two layers | X: Type III secretory system chaperone-like | H: MRB1590 N-terminal domain (From Topology) | T: MRB1590 N-terminal domain | F: ABC_ATPase_N | ECOD (1.6) |
B [auth A] | ABC_ATPase_C | e4yiyA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_ATPase_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF09818 | P-loop domain (ABC_ATPase) | P-loop domain | This is the C-terminal ATPase domain from bacterial ABC class ATPases. This entry also includes MRB1590 (Swiss:Q57ZF2) from Trypanosoma brucei brucei has a central ATPase domain homologous to this domain [1]. | Domain |
A [auth B], B [auth A] | PF21117 | MRB1590 C-terminal domain (MRB1590_C) | MRB1590 C-terminal domain | This entry represents the C-terminal helix-turn-helix like domain from the T. brucei kRNA editing factor MRB1590 [1]. | Domain |