Crystal Structure of a Thermotoga maritima Hfq homolog
External Resource: Annotation
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Pleiotropic translational regulator Hfq | 8058962 | 4002164 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Sm-like ribonucleoproteins | 8058963 | 3000419 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | Hfq_1 | e4y91A1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
B | Hfq_1 | e4y91B1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
C | Hfq_1 | e4y91C1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
D | Hfq_1 | e4y91D1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
E | Hfq_1 | e4y91E1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
F | Hfq_1 | e4y91F1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
G | Hfq_1 | e4y91G1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
H | Hfq_1 | e4y91H1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
I | Hfq_1 | e4y91I1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
J | Hfq_1 | e4y91J1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
K | Hfq_1 | e4y91K1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
L | Hfq_1 | e4y91L1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Hfq_1 | ECOD (1.6) |
Chains | Accession | Name | Description | Comments | Source |
---|
A, B, C, D, E, F, G, H, I, J, K, L | PF17209 | Hfq protein (Hfq) | Hfq protein | - | Domain |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
A, B, C, D, E, F, G, H, I, J, K, L | RNA-binding protein Hfq | | | |
M [auth N], N [auth O] | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | - | - | - |
Chains | Accession | Name | Type |
---|
A, B, C, D, E, F, G, H, I, J, K, L | IPR010920 | LSM domain superfamily | Homologous Superfamily |
A, B, C, D, E, F, G, H, I, J, K, L | IPR005001 | RNA-binding protein Hfq | Family |
A, B, C, D, E, F, G, H, I, J, K, L | IPR047575 | Sm domain | Domain |