Crystal structure of AgrA LytTR domain in complex with promoters
External Resource: Annotation
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | Chromo domain-like | 8092313 | 3000161 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Chromo domain-like | 8092314 | 3000161 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Chromo domain-like | 8092313 | 3000161 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Chromo domain-like | 8092314 | 3000161 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Chromo domain-like | 8092313 | 3000161 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Chromo domain-like | 8092314 | 3000161 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Chromo domain-like | 8092313 | 3000161 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Chromo domain-like | 8092314 | 3000161 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | LytTR_C | e4xqqA2 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytTR_C | ECOD (1.6) |
A | LytT | e4xqqA1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytT | ECOD (1.6) |
B | LytTR_C | e4xqqB2 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytTR_C | ECOD (1.6) |
B | LytT | e4xqqB1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytT | ECOD (1.6) |
C | LytTR_C | e4xqqC2 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytTR_C | ECOD (1.6) |
C | LytT | e4xqqC1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytT | ECOD (1.6) |
D | LytTR_C | e4xqqD2 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytTR_C | ECOD (1.6) |
D | LytT | e4xqqD1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytT | ECOD (1.6) |
Chains | Accession | Name | Description | Comments | Source |
---|
| PF04397 | LytTr DNA-binding domain (LytTR) | LytTr DNA-binding domain | This domain is found in a variety of bacterial transcriptional regulators. The domain binds to a specific DNA sequence pattern (see [1]). | Domain |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
| Accessory gene regulator A | | - | |
| DNA (5'-D(*TP*CP*GP*AP*CP*TP*AP*GP*TP*TP*AP*AP*GP*AP*AP*A)-3') | - | - | - |
| DNA (5'-D(*AP*TP*TP*TP*CP*TP*TP*AP*AP*CP*TP*AP*GP*TP*CP*G)-3') | - | - | - |