4WY0
PdxS (G. stearothermophilus) co-crystallized with R5P in the presence of ammonia.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF01680 | e4wy0C1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
I | PF01680 | e4wy0I1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
A | PF01680 | e4wy0A1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
E | PF01680 | e4wy0E1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
G | PF01680 | e4wy0G1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
J | PF01680 | e4wy0J1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
K | PF01680 | e4wy0K1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
L | PF01680 | e4wy0L1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
B | PF01680 | e4wy0B1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
D | PF01680 | e4wy0D1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
H | PF01680 | e4wy0H1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
F | PF01680 | e4wy0F1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01680 | SOR/SNZ family (SOR_SNZ) | SOR/SNZ family | Members of this family are enzymes involved in a new pathway of pyridoxine/pyridoxal 5-phosphate biosynthesis [1]. This family was formerly known as UPF0019. | Domain | |
PF01680 | SOR/SNZ family (SOR_SNZ) | SOR/SNZ family | Members of this family are enzymes involved in a new pathway of pyridoxine/pyridoxal 5-phosphate biosynthesis [1]. This family was formerly known as UPF0019. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011060 | Ribulose-phosphate binding barrel | Homologous Superfamily | |
IPR001852 | Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR033755 | PdxS/SNZ N-terminal domain | Domain | |
IPR011060 | Ribulose-phosphate binding barrel | Homologous Superfamily | |
IPR001852 | Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR033755 | PdxS/SNZ N-terminal domain | Domain | |
IPR011060 | Ribulose-phosphate binding barrel | Homologous Superfamily | |
IPR001852 | Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR033755 | PdxS/SNZ N-terminal domain | Domain |