Crystal structure of an ABC transporter solute binding protein (IPR025997) from Agrobacterium vitis (Avi_5165, Target EFI-511223) with bound allitol


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BChal_sti_synt_Ce4wt7B2 A: alpha arraysX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: N-terminal domain of Delta(14)-sterol reductase, MaSR1F: Chal_sti_synt_CECOD (v295)
BAcyl-CoA_dh_1e4wt7B1 A: alpha arraysX: omega toxin-likeH: HTHT: Three-helical HTHF: Acyl-CoA_dh_1ECOD (v295)
AAcyl-CoA_dh_1e4wt7A1 A: alpha arraysX: omega toxin-likeH: HTHT: Three-helical HTHF: Acyl-CoA_dh_1ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
A3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13407Periplasmic binding protein domain (Peripla_BP_4)Periplasmic binding protein domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
ABC transporter substrate binding protein (Ribose) -