Skip to main content

 4WBR | pdb_00004wbr

Structure of Bradyrhizobium japonicum ScoI with copper bound

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
A [auth D]d4wbrd_ Alpha and beta proteins (a/b) Thioredoxin fold Thioredoxin-like automated matches automated matches (Bradyrhizobium diazoefficiens USDA 110 ) [TaxId: 224911 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth D]SH2e4wbrD1 A: alpha arraysX: Piezo CTL2 domainH: Piezo CTL2 domainT: S-adenosyl-L-methionine-dependent methyltransferasesF: SH2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth D]3.40.30.10 Alpha Beta 3-Layer(aba) Sandwich Glutaredoxin GlutaredoxinCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth D]PF02630SCO1/SenC (SCO1-SenC)SCO1/SenCThis family is involved in biogenesis of respiratory and photosynthetic systems. SCO1 (Swiss:P23833) is required for a post-translational step in the accumulation of subunits COXI and COXII of cytochrome c oxidase [1]. SenC (Swiss:Q52720) is required ...This family is involved in biogenesis of respiratory and photosynthetic systems. SCO1 (Swiss:P23833) is required for a post-translational step in the accumulation of subunits COXI and COXII of cytochrome c oxidase [1]. SenC (Swiss:Q52720) is required for optimal cytochrome c oxidase activity and maximal induction of genes encoding the light-harvesting and reaction centre complexes of R. capsulatus [2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth D]IPR013766Thioredoxin domainDomain
A [auth D]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
A [auth D]IPR003782Copper chaperone SCO1/SenCFamily