4V4A | pdb_00004v4a

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

External Resource: Annotation

Domain Annotation: ECOD Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth AD]	FlaF_Ig-like	e4v4aAD1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v295)
F [auth AF]	P22_portal	e4v4aAF1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
J [auth AJ]	P22_portal	e4v4aAJ1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
O [auth AO]	P22_portal	e4v4aAO1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
Q [auth AQ]	Ribosomal_S17,Ribosomal_S17_N	e4v4aAQ1	A: alpha arrays	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Ribosomal_S17,Ribosomal_S17_N	ECOD (v295)
FA [auth BJ]	AP_endonuc_2	e4v4aBJ1	A: alpha arrays	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: AP_endonuc_2	ECOD (v295)
GA [auth BK]	AP_endonuc_2	e4v4aBK1	A: alpha arrays	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: AP_endonuc_2	ECOD (v295)
HA [auth BL]	P22_portal	e4v4aBL1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
IA [auth BM]	AP_endonuc_2	e4v4aBM1	A: alpha arrays	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: AP_endonuc_2	ECOD (v295)
JA [auth BN]	AP_endonuc_2	e4v4aBN1	A: alpha arrays	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: AP_endonuc_2	ECOD (v295)
KA [auth BO]	P22_portal	e4v4aBO1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
LA [auth BP]	P22_portal	e4v4aBP1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
NA [auth BR]	P22_portal	e4v4aBR1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
PA [auth BT]	VipB_2	e4v4aBT1	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: DHS-like NAD/FAD-binding domain	F: VipB_2	ECOD (v295)
QA [auth BU]	P22_portal	e4v4aBU1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
TA [auth BX]	P22_portal	e4v4aBX1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
VA [auth BZ]	P22_portal	e4v4aBZ1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
WA [auth B1]	AP_endonuc_2	e4v4aB11	A: alpha arrays	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: AP_endonuc_2	ECOD (v295)
YA [auth B3]	P22_portal	e4v4aB31	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
ZA [auth B4]	P22_portal	e4v4aB41	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
AB [auth B5]	P22_portal	e4v4aB51	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
I [auth AI]	FlaF_Ig-like	e4v4aAI1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v295)
H [auth AH]	P22_portal	e4v4aAH1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
G [auth AG]	P22_portal	e4v4aAG1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
XA [auth B2]	P22_portal	e4v4aB21	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
E [auth AE]	P22_portal	e4v4aAE1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
UA [auth BY]	P22_portal	e4v4aBY1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
SA [auth BW]	P22_portal	e4v4aBW1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
OA [auth BS]	P22_portal	e4v4aBS1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
MA [auth BQ]	P22_portal	e4v4aBQ1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
EA [auth BI]	P22_portal	e4v4aBI1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
DA [auth BH]	P22_portal	e4v4aBH1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
C [auth AC]	P22_portal	e4v4aAC1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
CA [auth BG]	P22_portal	e4v4aBG1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
BA [auth BF]	P22_portal	e4v4aBF1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
AA [auth BE]	P22_portal	e4v4aBE1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
Z [auth BD]	P22_portal	e4v4aBD1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
Y [auth BC]	P22_portal	e4v4aBC1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
X [auth BB]	AP_endonuc_2	e4v4aBB1	A: alpha arrays	X: Cytochrome P450	H: Cytochrome P450	T: Cytochrome P450	F: AP_endonuc_2	ECOD (v295)
W [auth BA]	P22_portal	e4v4aBA1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
T [auth AT]	P22_portal	e4v4aAT1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
B [auth AB]	FlaF_Ig-like	e4v4aAB1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v295)
S [auth AS]	Cellulase	e4v4aAS1	A: alpha arrays	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: Cellulase	ECOD (v295)
R [auth AR]	P22_portal	e4v4aAR1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
P [auth AP]	P22_portal	e4v4aAP1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
N [auth AN]	P22_portal	e4v4aAN1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
M [auth AM]	Cellulase	e4v4aAM1	A: alpha arrays	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: Cellulase	ECOD (v295)
L [auth AL]	P22_portal	e4v4aAL1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)
K [auth AK]	P22_portal	e4v4aAK1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: P22_portal	ECOD (v295)

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.