Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
A [auth a]d4v1aa_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
J [auth j]d4v1aj_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
K [auth k]d4v1ak_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
L [auth l]d4v1al_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
M [auth m]d4v1am_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
N [auth n]d4v1an_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
O [auth o]d4v1ao_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
P [auth p]d4v1ap_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Q [auth q]d4v1aq_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
R [auth t]d4v1at_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
S [auth u]d4v1au_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
B [auth b]d4v1ab_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
T [auth v]d4v1av_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
U [auth w]d4v1aw_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
V [auth x]d4v1ax_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
W [auth z]d4v1az_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
C [auth c]d4v1ac_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
D [auth d]d4v1ad_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
E [auth e]d4v1ae_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
F [auth f]d4v1af_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
G [auth g]d4v1ag_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
H [auth h]d4v1ah_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
I [auth i]d4v1ai_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Eukaryotic, mitochondrial (54S or 39S subunit) (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth a]PDCD9e4v1aa1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
J [auth j]MRP-L46e4v1aj1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: MRP-L46ECOD (1.6)
K [auth k]Ribosomal_S10_2e4v1ak1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
L [auth l]Img2e4v1al1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: Img2ECOD (1.6)
M [auth m]Ribosomal_L50e4v1am1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: Ribosomal_L50ECOD (1.6)
N [auth n]MRP-L51e4v1an1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: MRP-L51ECOD (1.6)
O [auth o]EUF08791e4v1ao1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: EUF08791ECOD (1.6)
P [auth p]MRP_L53e4v1ap1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: MRP_L53ECOD (1.6)
R [auth t]MRP-63e4v1at1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: MRP-63ECOD (1.6)
S [auth u]RF-1_Ne4v1au1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
B [auth b]PBPe4v1ab1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (1.6)
T [auth v]CR6_interacte4v1av1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: CR6_interactECOD (1.6)
U [auth w]PDCD9e4v1aw1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
V [auth x]Ribosomal_S18e4v1ax1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
C [auth c]TGSe4v1ac2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TGSECOD (1.6)
C [auth c]tRNA_SADe4v1ac1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: tRNA_SADECOD (1.6)
D [auth d]MRP-L28e4v1ad1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: MRP-L28ECOD (1.6)
E [auth e]MRP-L27e4v1ae1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: MRP-L27ECOD (1.6)
F [auth f]MRP-S32e4v1af1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: MRP-S32ECOD (1.6)
G [auth g]L51_S25_CI-B8e4v1ag1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
H [auth h]Ribonucleas_3_3e4v1ah1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: Ribonucleas_3_3ECOD (1.6)
H [auth h]dsrme4v1ah2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: dsrmECOD (1.6)
I [auth i]Tim44e4v1ai1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: Tim44ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth a]MITORIBOSOMAL PROTEIN ML37, MRPL37---
J [auth j]MITORIBOSOMAL PROTEIN ML46, MRPL46 -
K [auth k]MITORIBOSOMAL PROTEIN ML48, MRPL48- -
L [auth l]MITORIBOSOMAL PROTEIN ML49, MRPL49
M [auth m]MITORIBOSOMAL PROTEIN ML50, MRPL50- -
N [auth n]MITORIBOSOMAL PROTEIN ML51, MRPL51---
O [auth o]MITORIBOSOMAL PROTEIN ML52, MRPL52
P [auth p]MITORIBOSOMAL PROTEIN ML53, MRPL53- - -
Q [auth q]MITORIBOSOMAL PROTEIN ML54, MRPL54---
R [auth t]MITORIBOSOMAL PROTEIN ML63, MRPL57, MRP63---
S [auth u]MITORIBOSOMAL PROTEIN ML62, MRPL58, ICT1 -
B [auth b]MITORIBOSOMAL PROTEIN ML38, MRPL38- -
T [auth v]MITORIBOSOMAL PROTEIN ML64, MRPL59, CRIF1---
U [auth w]MITORIBOSOMAL PROTEIN ML65, MRPS30---
V [auth x]MITORIBOSOMAL PROTEIN ML66, MRPS18A
W [auth z]UNASSIGNED SECONDARY STRUCTURE ELEMENTS---
C [auth c]MITORIBOSOMAL PROTEIN ML39, MRPL39 - -
D [auth d]MITORIBOSOMAL PROTEIN ML40, MRPL40---
E [auth e]MITORIBOSOMAL PROTEIN ML41, MRPL41---
F [auth f]MITORIBOSOMAL PROTEIN ML42, MRPL42---
G [auth g]MITORIBOSOMAL PROTEIN ML43, MRPL43
H [auth h]MITORIBOSOMAL PROTEIN ML44, MRPL44
I [auth i]MITORIBOSOMAL PROTEIN ML45, MRPL45---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth j]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
J [auth j]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
J [auth j]IPR040008Large ribosomal subunit protein mL46Family
J [auth j]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
K [auth k]IPR027486Small ribosomal subunit protein uS10 domainDomain
K [auth k]IPR027487Large ribosomal subunit protein mL48Family
K [auth k]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
L [auth l]IPR005484Large ribosomal subunit protein uL18Family
L [auth l]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
M [auth m]IPR018305Large ribosomal subunit protein mL50Family
O [auth o]IPR034596Large ribosomal subunit protein mL52Family
P [auth p]IPR026700Coiled-coil domain-containing protein 142Family
S [auth u]IPR000352Peptide chain release factor class IDomain
S [auth u]IPR052104Mitochondrial Release Factor mL62Family
B [auth b]IPR036610PEBP-like superfamilyHomologous Superfamily
B [auth b]IPR008914Phosphatidylethanolamine-binding proteinFamily
B [auth b]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
V [auth x]IPR001648Small ribosomal subunit protein bS18Family
V [auth x]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
C [auth c]IPR012676TGS-likeHomologous Superfamily
C [auth c]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
C [auth c]IPR050062Proline-tRNA synthetaseFamily
C [auth c]IPR004095TGSDomain
C [auth c]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
G [auth g]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
G [auth g]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
G [auth g]IPR039927Large ribosomal subunit protein mL43Family
H [auth h]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
H [auth h]IPR014720Double-stranded RNA-binding domainDomain
H [auth h]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily