Annotations: 4URQ

Crystal Structure of GGDEF domain (I site mutant) from T.maritima

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F [auth Z]	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8100720	3001272	SCOP2B (2022-06-29)
E [auth Y]	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8100720	3001272	SCOP2B (2022-06-29)
D [auth X]	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8100720	3001272	SCOP2B (2022-06-29)
C [auth W]	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8100720	3001272	SCOP2B (2022-06-29)
B [auth V]	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8100720	3001272	SCOP2B (2022-06-29)
A [auth U]	SCOP2B Superfamily	Nucleotide cyclase/DNA polymerase palm domain-like	8100720	3001272	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth Z]	NO_synthase	e4urqZ1	A: beta barrels	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: NO_synthase	ECOD (v294.2)
E [auth Y]	NO_synthase	e4urqY1	A: beta barrels	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: NO_synthase	ECOD (v294.2)
D [auth X]	NO_synthase	e4urqX1	A: beta barrels	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: NO_synthase	ECOD (v294.2)
C [auth W]	NO_synthase	e4urqW1	A: beta barrels	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: NO_synthase	ECOD (v294.2)
B [auth V]	NO_synthase	e4urqV1	A: beta barrels	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: NO_synthase	ECOD (v294.2)
A [auth U]	NO_synthase	e4urqU1	A: beta barrels	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: NO_synthase	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F [auth Z]	3.30.70.270	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Reverse transcriptase/Diguanylate cyclase domain	CATH (4.3.0)
E [auth Y]	3.30.70.270	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Reverse transcriptase/Diguanylate cyclase domain	CATH (4.3.0)
D [auth X]	3.30.70.270	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Reverse transcriptase/Diguanylate cyclase domain	CATH (4.3.0)
C [auth W]	3.30.70.270	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Reverse transcriptase/Diguanylate cyclase domain	CATH (4.3.0)
B [auth V]	3.30.70.270	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Reverse transcriptase/Diguanylate cyclase domain	CATH (4.3.0)
A [auth U]	3.30.70.270	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Reverse transcriptase/Diguanylate cyclase domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], F [auth Z]	DIGUANYLATE CYCLASE	binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], F [auth Z]	IPR000160	GGDEF domain	Domain
A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], F [auth Z]	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	Homologous Superfamily
A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], F [auth Z]	IPR052163	Diguanylate Cyclase/Regulatory Protein	Family
A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], A [auth U], B [auth V], C [auth W], D [auth X], E [auth Y], F [auth Z]	IPR029787	Nucleotide cyclase	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.