4U1M
HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 escape through identical epitopes
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054581 | 3000071 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | MHC antigen-recognition domain | 8055662 | 3000521 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | C1-set_2 | e4u1mA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
A | MHC_I | e4u1mA1 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_I | ECOD (1.6) |
B | C1-set_2 | e4u1mB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.500.10 | Alpha Beta | 2-Layer Sandwich | Murine Class I Major Histocompatibility Complex, H2-DB | Chain A, domain 1 | CATH (4.3.0) |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
MH1 HLA-B*4201 | I-ALPHA | Homo sapiens (human) | HLA-B*0702, HLA-B*0704, HLA-B*0705, HLA-B*0706, HLA-B*0707, HLA-B*0709, HLA-B*0712, HLA-B*0714, HLA-B*0717, HLA-B*0718, HLA-B*0719, HLA-B*0720, HLA-B*0722, HLA-B*0724, HLA-B*0725, HLA-B*0726, HLA-B*0728, HLA-B*4201, HLA-B*4204, HLA-B*5510, HLA-B*6701, HLA-B*8101, HLA-B*0734, HLA-B*0742, HLA-B*0744, HLA-B*0745, HLA-B*4205, HLA-B*0740, HLA-B*0733, HLA-B*4208, HLA-B*0731, HLA-B*4206, HLA-B*0735, HLA-B*0743, HLA-B*8102, HLA-B*0748, HLA-B*0751, HLA-B*0758, HLA-B*0760, HLA-B*0755, HLA-B*0753, HLA-B*0759, HLA-B*0752, HLA-B*8103, HLA-B*0766, HLA-B*0764, HLA-B*0761, HLA-B*0762, HLA-B*4210, HLA-B*4212, HLA-B*0777, HLA-B*0795, HLA-B*0796, HLA-B*0799, HLA-B*4213, HLA-B*0774, HLA-B*0780, HLA-B*0778, HLA-B*0784, HLA-B*0798, HLA-B*0782, HLA-B*0787, HLA-B*0790, HLA-B*0793, HLA-B*0789 | G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2, C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202438-0) | |
MH1 HLA-B*4201 | B2M | Homo sapiens (human) | B2M*01, B2M*02 | C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202438-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00129 | Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I) | Class I Histocompatibility antigen, domains alpha 1 and 2 | - | Domain | |
PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain | |
PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain | |