4TXQ
Crystal structure of LIP5 N-terminal domain complexed with CHMP1B MIM
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Vta1_C | e4txqA2 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: Vta1_C | ECOD (1.6) |
A | Vta1_N | e4txqA1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: Vta1_N | ECOD (1.6) |
B | Vta1_C | e4txqB1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: Vta1_C | ECOD (1.6) |
B | Vta1_N | e4txqB2 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: Vta1_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.40.270 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Vacuolar protein sorting-associated protein vta1 | CATH (4.3.0) |
B | 1.25.40.270 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Vacuolar protein sorting-associated protein vta1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04652 | Vta1 like (Vta1) | Vta1 like | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR039431 | Vta1/callose synthase, N-terminal | Domain | |
IPR023175 | Vta1/Callose synthase, N-terminal domain superfamily | Homologous Superfamily | |
IPR041212 | Vta1, C-terminal | Domain | |
IPR044538 | Vacuolar protein sorting-associated protein Vta1-like | Family | |
IPR005024 | Snf7 family | Family |