Skip to main content

 4TVG | pdb_00004tvg

HIV Protease (PR) dimer in closed form with pepstatin in active site and fragment AK-2097 in the outside/top of flap

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyAcid proteases 8100324 3001059 SCOP2B (2022-06-29)
ASCOP2 FamilyRetroviral protease (retropepsin) 8100323 4002288 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyAcid proteases 8100324 3001059 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BSNFe4tvgB1 A: alpha arraysX: Mitochondrial mTERF-likeH: Transcription activator-like effector (TALE)T: Transcription activator-like effector (TALE)F: SNFECOD (v295.2)
ASNFe4tvgA1 A: alpha arraysX: Mitochondrial mTERF-likeH: Transcription activator-like effector (TALE)T: Transcription activator-like effector (TALE)F: SNFECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.70.10 Mainly Beta Beta Barrel Cathepsin D, subunit A domain 1CATH (4.3.0)
A2.40.70.10 Mainly Beta Beta Barrel Cathepsin D, subunit A domain 1CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Pepstatin---
A, B
HIV Protease -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR034170Retropepsin-like catalytic domainDomain
A, B
IPR021109Aspartic peptidase domain superfamilyHomologous Superfamily
A, B
IPR001969Aspartic peptidase, active siteActive Site
A, B
IPR001995Peptidase A2A, retrovirus, catalyticDomain
A, B
IPR018061RetropepsinsDomain